Project name: query_structure

Status: done

Started: 2026-03-16 23:03:29
Settings
Chain sequence(s) A: DGECGGFWWKCGRGKPPCCKGYACSKTWGWCAVEAP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:29)
Show buried residues

Minimal score value
-3.2199
Maximal score value
2.8267
Average score
-0.7181
Total score value
-25.8524

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.3815
2 G A -2.2399
3 E A -2.3631
4 C A -0.6221
5 G A 0.2562
6 G A 1.4538
7 F A 2.8267
8 W A 2.4116
9 W A 1.3093
10 K A -1.0117
11 C A 0.0000
12 G A -2.6197
13 R A -3.2199
14 G A -2.7456
15 K A -2.9266
16 P A -1.6049
17 P A -1.2570
18 C A -0.2855
19 C A -0.4391
20 K A -1.7363
21 G A -0.9887
22 Y A 0.3147
23 A A -0.2754
24 C A -0.9653
25 S A -1.6409
26 K A -2.6516
27 T A -0.6327
28 W A 0.1780
29 G A -0.7238
30 W A -0.1236
31 C A 0.0000
32 A A 1.2356
33 V A 0.4216
34 E A -1.4421
35 A A -0.7078
36 P A -0.6551
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Laboratory of Theory of Biopolymers 2018