Project name: query_structure

Status: done

Started: 2026-03-16 23:39:23
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Chain sequence(s) A: RQLLKDSFMVELVEGARKLRHVFLFTDLLLCTKLQYDCKWYIPLTDLSFQMVDEPSMMAFRVHSSRNGKSYTFLISSDYERAEWRENIREQQKKCFRSFSLTSVELQMLTNSC
C: GSVSSVPTKLEVVAATPTSSLLISWDAPAVTVVFYVITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDDYTITVYAEYYGMMTGSSPISINYRT
B: SSVPTKLEVVAATPTSLLISWDAPAVTVVFYVITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAEYYGMTGSPISSINYRT
D: RQLLKDSSFMVELVEGARKLRHVFLFTDLLLCTKLKQYDCCKWYIPLTDLSFQMVDEPSMAFRVHSSRNGKSYTFLISSDYERAEWRENIREQQKKCFRSFSSLTSVELQMLTNSC
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:15)
Show buried residues

Minimal score value
-4.1262
Maximal score value
1.8351
Average score
-0.6525
Total score value
-263.6077

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
707 R D -2.3096
708 Q D -1.7918
709 L D -0.4818
710 L D -0.5092
711 K D -1.2580
712 D D -1.3249
713 S D -0.6437
714 F D 0.1508
715 M D 0.0000
716 V D 0.0000
717 E D 0.0000
718 L D -0.0802
719 V D -0.5018
720 E D -1.7409
721 G D -1.4938
722 A D -1.0184
723 R D -0.8511
724 K D -0.7535
725 L D -0.0210
726 R D 0.0000
727 H D 0.0000
728 V D 0.0000
729 F D 0.0000
730 L D 0.0000
731 F D 0.0000
732 T D -1.4867
733 D D -1.1387
734 L D 0.0000
735 L D 0.0000
736 L D 0.0000
737 C D 0.0000
738 T D 0.0000
739 K D -2.1908
740 L D -1.5452
741 K D -2.4574
750 Q D -2.1038
751 Y D -2.2360
752 D D -2.8774
753 C D -1.6602
754 K D -1.8787
755 W D -0.6764
756 Y D 0.0690
757 I D 0.0000
758 P D -0.3917
759 L D 0.0000
760 T D -0.8529
761 D D -1.2770
762 L D 0.0000
763 S D -1.0979
764 F D -0.8753
765 Q D -0.9838
766 M D -1.0741
767 V D 0.0000
768 D D -2.9656
769 E D -2.7924
830 P D -1.9040
831 S D -1.9450
832 M D -1.3850
833 A D 0.0000
834 F D 0.0000
835 R D -0.6669
836 V D 0.0000
837 H D -1.7928
838 S D 0.0000
839 R D -3.1427
840 N D -2.9462
841 G D -2.5271
842 K D -2.6154
843 S D -1.5668
844 Y D -0.2726
845 T D -0.0709
846 F D 0.0000
847 L D 0.0000
848 I D 0.0000
849 S D -0.5248
850 S D -1.0573
851 D D -1.7515
852 Y D -0.0695
853 E D -1.0550
854 R D -1.2144
855 A D -1.2671
856 E D -2.0143
857 W D 0.0000
858 R D -2.5050
859 E D -3.5485
860 N D -2.6626
861 I D 0.0000
862 R D -4.0763
863 E D -4.1262
864 Q D 0.0000
865 Q D -2.8460
866 K D -3.2586
867 K D -2.9133
868 C D -1.2030
869 F D 0.2430
870 R D -1.1169
871 S D -0.5505
872 F D -0.1487
873 S D -0.0386
874 L D 0.0989
875 T D 0.1350
876 S D 0.2417
877 V D 1.3237
878 E D -0.0570
879 L D -0.0766
880 Q D -0.1364
881 M D 0.7464
882 L D 0.1331
883 T D 0.0000
884 N D -0.7099
885 S D 0.1290
886 C D 0.3499
707 R A -2.2299
708 Q A -1.6317
709 L A -0.1046
710 L A -0.1887
711 K A -0.9949
712 D A -0.8584
713 S A -0.4243
714 F A 0.4160
715 M A 0.0000
716 V A 0.0000
717 E A 0.0000
718 L A -0.1190
719 V A -0.5714
720 E A -1.7668
721 G A -1.5119
722 A A -1.0886
723 R A -0.8577
724 K A -0.8367
725 L A 0.0370
726 R A 0.0000
727 H A -0.4122
728 V A 0.0000
729 F A 0.0000
730 L A 0.0000
731 F A 0.0000
732 T A -1.2530
733 D A -0.9264
734 L A 0.0000
735 L A 0.0000
736 L A 0.0000
737 C A 0.0000
738 T A 0.0000
739 K A -1.9160
740 L A 0.0384
750 Q A -1.2545
751 Y A -1.3965
752 D A -2.4641
753 C A -1.5237
754 K A -1.9833
755 W A 0.0000
756 Y A 0.0606
757 I A 0.0000
758 P A 0.0000
759 L A 0.0000
760 T A -0.4249
761 D A 0.0000
762 L A 0.0000
763 S A 0.0000
764 F A 0.0000
765 Q A -0.4072
766 M A -0.9645
767 V A 0.0000
768 D A -2.9300
769 E A -2.7966
830 P A -1.8825
831 S A -1.9815
832 M A -1.4672
833 A A 0.0000
834 F A 0.0000
835 R A -0.5111
836 V A 0.0000
837 H A -1.2935
838 S A 0.0000
839 R A -2.5563
840 N A -2.7034
841 G A -2.4107
842 K A -2.5393
843 S A -1.4816
844 Y A -0.2851
845 T A -0.0045
846 F A 0.0000
847 L A 0.0000
848 I A 0.0000
849 S A -0.6233
850 S A -1.1594
851 D A -1.8885
852 Y A -0.2470
853 E A -1.3760
854 R A -1.3388
855 A A -1.3292
856 E A -1.9903
857 W A 0.0000
858 R A -1.9056
859 E A -3.0212
860 N A -2.1960
861 I A 0.0000
862 R A -2.5651
863 E A -3.3400
864 Q A 0.0000
865 Q A 0.0000
866 K A -2.6770
867 K A -2.6536
868 C A -0.9902
869 F A 0.4430
870 R A -1.0306
871 S A -0.5725
872 F A 0.1015
873 S A 0.0491
874 L A 0.0365
875 T A -0.0971
876 S A -0.1487
877 V A 0.1285
878 E A -0.4121
879 L A -0.2796
880 Q A -0.5753
881 M A 0.0862
882 L A 0.0000
883 T A -0.6862
884 N A -0.7793
885 S A -0.1679
886 C A -0.2282
1 G C -0.1649
2 S C 0.2382
3 V C 1.3415
4 S C 0.5734
5 S C 0.4510
6 V C 0.3111
7 P C 0.0000
8 T C -1.5690
9 K C -2.5384
10 L C 0.0000
11 E C -1.6581
12 V C 0.1893
13 V C 1.3691
14 A C 0.8356
15 A C 0.2988
16 T C -0.1813
17 P C -1.1253
18 T C -1.0209
19 S C -0.5088
20 L C 0.0000
21 L C 0.8067
22 I C 0.0000
23 S C -0.8897
24 W C 0.0000
25 D C -2.5320
26 A C -1.1217
27 P C 0.1556
28 A C 0.5820
29 V C 1.1374
30 T C 0.4509
31 V C 0.2868
32 V C 0.2478
33 F C 0.0000
34 Y C 0.0000
35 V C 0.0000
36 I C 0.0000
37 T C -0.1128
38 Y C -0.0127
39 G C 0.0000
40 E C -1.2536
41 T C -1.1013
42 G C -1.1938
43 G C -1.2305
44 N C -1.4666
45 S C -0.7760
46 P C -0.1740
47 V C 0.6581
48 Q C -0.5896
49 E C -0.7462
50 F C -0.2502
51 T C -0.0263
52 V C -0.2300
53 P C -0.5974
54 G C -0.5416
55 S C -1.0435
56 K C -2.0314
57 S C -1.3905
58 T C -0.6788
59 A C 0.0000
60 T C 0.1310
61 I C 0.0000
62 S C -0.6450
63 G C -1.0304
64 L C 0.0000
65 K C -2.3532
66 P C -1.7699
67 G C -1.5004
68 V C -1.4219
69 D C -2.0436
70 Y C 0.0000
71 T C -0.6992
72 I C 0.0000
73 T C -0.1927
74 V C 0.0000
75 Y C 0.0000
76 A C 0.0000
77 E C 0.0000
78 Y C 0.0000
79 Y C -0.0242
80 G C -0.2244
81 M C 0.1607
82 T C -0.0452
83 G C 0.0000
84 S C -0.1287
85 P C -0.1307
86 I C 0.0450
87 S C -0.5365
88 I C -0.6110
89 N C -1.6585
90 Y C -1.3571
91 R C -2.5188
92 T C -1.7136
4 S B -0.1452
5 S B 0.0431
6 V B 0.1280
7 P B 0.0000
8 T B -1.5520
9 K B -2.6029
10 L B 0.0000
11 E B -2.1282
12 V B -0.3863
13 V B 0.2466
14 A B 0.0571
15 A B 0.2536
16 T B -0.0887
17 P B -0.8898
18 T B -0.9150
19 S B -0.4667
20 L B 0.0000
21 L B 0.4793
22 I B 0.0000
23 S B -1.1423
24 W B 0.0000
25 D B -2.4315
26 A B -0.8450
27 P B 0.0220
28 A B 0.7258
29 V B 1.8351
30 T B 1.2982
31 V B 1.1009
32 V B 1.4554
33 F B 0.7009
34 Y B 0.0000
35 V B 0.0000
36 I B 0.0000
37 T B -0.5992
38 Y B -0.3138
39 G B 0.0000
40 E B -1.2211
41 T B -0.9986
42 G B -1.1294
43 G B -1.1457
44 N B -1.4777
45 S B -0.8173
46 P B -0.3160
47 V B 0.3785
48 Q B -1.1676
49 E B -1.7162
50 F B -0.5278
51 T B 0.0495
52 V B 0.0013
53 P B -0.2258
54 G B 0.0709
55 S B -0.6281
56 K B -1.9058
57 S B -1.2702
58 T B -0.7756
59 A B 0.0000
60 T B 0.1170
61 I B 0.0000
62 S B -0.6201
63 G B -1.0037
64 L B 0.0000
65 K B -2.2851
66 P B -1.6534
67 G B -1.4200
68 V B -1.2723
69 D B -1.7432
70 Y B 0.0000
71 T B -0.6147
72 I B 0.0000
73 T B -0.3037
74 V B 0.0000
75 Y B 0.2452
76 A B 0.0000
77 E B 0.5551
78 Y B 1.1116
79 Y B 1.4224
80 G B 0.4686
81 M B 0.7011
82 T B 0.2998
83 G B 0.0000
84 S B -0.0742
85 P B -0.0130
86 I B 0.1044
87 S B -0.5032
88 I B -0.6956
89 N B -1.6660
90 Y B -1.4070
91 R B -2.3884
92 T B -1.5734
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Laboratory of Theory of Biopolymers 2018