| Chain sequence(s) |
A: LRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLFLERAAELMTRTSSVVTLEVAKQGAIYHGLAT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:00)
[INFO] Main: Simulation completed successfully. (00:01:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | -0.0133 | |
| 2 | R | A | -2.7413 | |
| 3 | K | A | -3.1885 | |
| 4 | E | A | -3.3505 | |
| 5 | P | A | -2.1018 | |
| 6 | E | A | -2.2783 | |
| 7 | I | A | -0.0695 | |
| 8 | I | A | 0.0796 | |
| 9 | T | A | -0.1190 | |
| 10 | V | A | 0.0000 | |
| 11 | T | A | -0.8704 | |
| 12 | L | A | 0.0000 | |
| 13 | K | A | -2.0360 | |
| 14 | K | A | -2.0349 | |
| 15 | Q | A | -2.4415 | |
| 16 | N | A | -2.2206 | |
| 17 | G | A | -1.4184 | |
| 18 | M | A | 0.0000 | |
| 19 | G | A | -0.1312 | |
| 20 | L | A | 0.1970 | |
| 21 | S | A | 0.0316 | |
| 22 | I | A | 0.0070 | |
| 23 | V | A | 0.1658 | |
| 24 | A | A | 0.3423 | |
| 25 | A | A | -0.3860 | |
| 26 | K | A | -2.3159 | |
| 27 | G | A | 0.0000 | |
| 28 | A | A | -0.8927 | |
| 29 | G | A | -1.4554 | |
| 30 | Q | A | -2.1844 | |
| 31 | D | A | -2.9249 | |
| 32 | K | A | -2.2405 | |
| 33 | L | A | -0.7107 | |
| 34 | G | A | 0.0000 | |
| 35 | I | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | K | A | -1.2885 | |
| 39 | S | A | -0.5305 | |
| 40 | V | A | 0.3097 | |
| 41 | V | A | 0.6255 | |
| 42 | K | A | -0.9673 | |
| 43 | G | A | -0.7596 | |
| 44 | G | A | -0.7822 | |
| 45 | A | A | 0.0000 | |
| 46 | A | A | 0.0000 | |
| 47 | D | A | -0.3637 | |
| 48 | V | A | 0.5205 | |
| 49 | D | A | -0.8061 | |
| 50 | G | A | -0.9657 | |
| 51 | R | A | -1.5452 | |
| 52 | L | A | 0.0000 | |
| 53 | A | A | -0.6638 | |
| 54 | A | A | -0.7021 | |
| 55 | G | A | -0.4950 | |
| 56 | D | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | L | A | 0.0000 | |
| 59 | L | A | 0.0138 | |
| 60 | S | A | -1.1445 | |
| 61 | V | A | 0.0000 | |
| 62 | D | A | -2.2514 | |
| 63 | G | A | -2.1035 | |
| 64 | R | A | -2.2440 | |
| 65 | S | A | -0.9854 | |
| 66 | L | A | 0.0000 | |
| 67 | V | A | 0.7138 | |
| 68 | G | A | -0.2079 | |
| 69 | L | A | 0.5112 | |
| 70 | F | A | 1.0249 | |
| 71 | L | A | 0.0114 | |
| 72 | E | A | -2.0913 | |
| 73 | R | A | -2.2892 | |
| 74 | A | A | 0.0000 | |
| 75 | A | A | -1.4731 | |
| 76 | E | A | -2.4211 | |
| 77 | L | A | -2.0720 | |
| 78 | M | A | 0.0000 | |
| 79 | T | A | -1.5904 | |
| 80 | R | A | -2.1634 | |
| 81 | T | A | -1.3731 | |
| 82 | S | A | -1.0256 | |
| 83 | S | A | -1.2503 | |
| 84 | V | A | -0.7176 | |
| 85 | V | A | 0.0000 | |
| 86 | T | A | -1.1717 | |
| 87 | L | A | 0.0000 | |
| 88 | E | A | -1.0487 | |
| 89 | V | A | 0.0000 | |
| 90 | A | A | 0.0000 | |
| 91 | K | A | -1.2537 | |
| 92 | Q | A | -1.1366 | |
| 93 | G | A | 0.0000 | |
| 94 | A | A | 0.0000 | |
| 95 | I | A | 1.0358 | |
| 96 | Y | A | -0.1615 | |
| 97 | H | A | -0.3279 | |
| 98 | G | A | 0.0215 | |
| 99 | L | A | 0.3198 | |
| 100 | A | A | 0.4885 | |
| 101 | T | A | 0.2149 |