Project name: 30627af6862c715

Status: done

Started: 2025-06-03 05:17:16
Settings
Chain sequence(s) H: EVQLLESGGGLVQPGGSMRLSCAASGFTFSNYWMNWVRQAPGKGLEWVAQIRLKSDNYATHYADSVKGRFTISRDDSKNTVYLQMNSLRAEDTGVYYCNDGPPSGSWGQGTLLTVSS
L: DIQMTQSPSSLSASVGDRVTITCRISENIYSYLAWYQQKPGKAPKLLVYNAKILVEGVPSRFSGSGSGTDFTLTISSLQPEDFGTYYCQHHYTVPWTFGQGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:10)
Show buried residues

Minimal score value
-2.953
Maximal score value
1.6362
Average score
-0.6166
Total score value
-138.1186

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.7282
2 V H -0.5367
3 Q H -0.8310
4 L H 0.0000
5 L H 0.6565
6 E H 0.0000
7 S H -0.2541
8 G H -0.6410
9 G H 0.2019
11 G H 0.8327
12 L H 1.3462
13 V H 0.0000
14 Q H -1.4154
15 P H -1.4393
16 G H -1.4551
17 G H -1.1797
18 S H -1.0855
19 M H -0.9150
20 R H -1.6870
21 L H 0.0000
22 S H -0.3455
23 C H 0.0000
24 A H -0.2452
25 A H 0.0000
26 S H -0.7957
27 G H -0.9476
28 F H -0.4206
29 T H -0.4146
30 F H 0.0000
35 S H -1.3576
36 N H -1.3106
37 Y H -0.1764
38 W H 0.2556
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.5963
45 A H -0.9911
46 P H -0.7991
47 G H -1.4557
48 K H -2.3639
49 G H -1.5802
50 L H 0.0000
51 E H -1.0189
52 W H 0.0000
53 V H 0.0000
54 A H 0.0000
55 Q H 0.0000
56 I H 0.0000
57 R H -0.8228
58 L H -1.3410
59 K H -2.4629
60 S H -1.7547
61 D H -1.6874
62 N H -2.0057
63 Y H -1.0787
64 A H -0.7444
65 T H -0.2627
66 H H -0.5396
67 Y H -0.9595
68 A H -1.3725
69 D H -2.5291
70 S H -1.7866
71 V H 0.0000
72 K H -2.6425
74 G H -1.7087
75 R H -1.4320
76 F H 0.0000
77 T H -0.8156
78 I H 0.0000
79 S H -0.2735
80 R H -0.9659
81 D H -1.3928
82 D H -1.8904
83 S H -1.5354
84 K H -2.3900
85 N H -1.8484
86 T H -1.0178
87 V H 0.0000
88 Y H -0.4288
89 L H 0.0000
90 Q H -1.1066
91 M H 0.0000
92 N H -1.3227
93 S H -1.2446
94 L H 0.0000
95 R H -2.3098
96 A H -1.7204
97 E H -2.2254
98 D H 0.0000
99 T H -0.3499
100 G H 0.0000
101 V H 0.8586
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 N H 0.0000
106 D H 0.0000
107 G H -0.0310
108 P H -0.2503
114 P H -0.2516
115 S H -0.6900
116 G H -0.2960
117 S H -0.3169
118 W H -0.4600
119 G H 0.0000
120 Q H -1.2558
121 G H -0.2765
122 T H 0.5784
123 L H 1.6362
124 L H 0.0000
125 T H 0.3581
126 V H 0.0000
127 S H -0.5729
128 S H -0.5704
1 D L -2.2136
2 I L 0.0000
3 Q L -2.2505
4 M L 0.0000
5 T L -1.3742
6 Q L 0.0000
7 S L -0.7029
8 P L -0.5691
9 S L -0.8108
10 S L -0.9943
11 L L -0.7809
12 S L -1.1200
13 A L 0.0000
14 S L -0.7230
15 V L 0.2757
16 G L -0.7029
17 D L -1.7401
18 R L -2.2355
19 V L 0.0000
20 T L -0.6118
21 I L 0.0000
22 T L -0.7865
23 C L 0.0000
24 R L -2.8776
25 I L 0.0000
26 S L -2.4360
27 E L -2.9530
28 N L -1.6194
29 I L 0.0000
36 Y L 0.7664
37 S L 0.2508
38 Y L 0.8153
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.7537
44 Q L 0.0000
45 K L -1.5203
46 P L -1.1032
47 G L -1.6167
48 K L -2.5666
49 A L -1.6023
50 P L 0.0000
51 K L -1.3795
52 L L 0.0000
53 L L 0.0000
54 V L 0.0000
55 Y L 0.0969
56 N L -0.0230
57 A L 0.0000
65 K L -1.2817
66 I L -0.0163
67 L L -0.0178
68 V L -0.7499
69 E L -1.7938
70 G L -1.2779
71 V L 0.0000
72 P L -0.5777
74 S L -0.5729
75 R L -0.7133
76 F L 0.0000
77 S L -0.5128
78 G L 0.0000
79 S L -1.0203
80 G L -1.1277
83 S L -0.7425
84 G L -0.8461
85 T L -1.8174
86 D L -2.0669
87 F L 0.0000
88 T L -0.9031
89 L L 0.0000
90 T L 0.0000
91 I L 0.0000
92 S L -1.2783
93 S L -1.1535
94 L L 0.0000
95 Q L -0.6345
96 P L -0.6635
97 E L -1.6036
98 D L 0.0000
99 F L -0.1287
100 G L 0.0000
101 T L -0.8791
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 H L 0.0000
107 H L 0.4641
108 Y L 1.1031
109 T L 0.3947
114 V L 0.3349
115 P L -0.3426
116 W L -0.0828
117 T L -0.5814
118 F L -0.4568
119 G L 0.0000
120 Q L -1.5501
121 G L 0.0000
122 T L 0.0000
123 K L -1.4874
124 L L 0.0000
125 E L -1.5435
126 I L -0.4323
127 K L -1.4939
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Laboratory of Theory of Biopolymers 2018