| Chain sequence(s) |
A: SPIYEFVKKEMLEYYEKHGVDKEKIEEVINFAAEHPDDPDEISFKIWDFAGEENSMEAMLFAAKVSDKIFEIAES
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:06)
[INFO] Main: Simulation completed successfully. (00:03:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -0.9423 | |
| 2 | P | A | -0.9761 | |
| 3 | I | A | 0.0000 | |
| 4 | Y | A | -1.8181 | |
| 5 | E | A | -2.3000 | |
| 6 | F | A | -1.6387 | |
| 7 | V | A | 0.0000 | |
| 8 | K | A | -2.8407 | |
| 9 | K | A | -3.1025 | |
| 10 | E | A | -2.5074 | |
| 11 | M | A | 0.0000 | |
| 12 | L | A | -2.4255 | |
| 13 | E | A | -3.5256 | |
| 14 | Y | A | 0.0000 | |
| 15 | Y | A | -2.5963 | |
| 16 | E | A | -3.4045 | |
| 17 | K | A | -3.1944 | |
| 18 | H | A | -2.4500 | |
| 19 | G | A | -2.1238 | |
| 20 | V | A | -2.0892 | |
| 21 | D | A | -3.2110 | |
| 22 | K | A | -3.7157 | |
| 23 | E | A | -4.1246 | |
| 24 | K | A | -3.6446 | |
| 25 | I | A | 0.0000 | |
| 26 | E | A | -3.7740 | |
| 27 | E | A | -3.6706 | |
| 28 | V | A | 0.0000 | |
| 29 | I | A | 0.0000 | |
| 30 | N | A | -2.6611 | |
| 31 | F | A | -1.8771 | |
| 32 | A | A | 0.0000 | |
| 33 | A | A | -2.0472 | |
| 34 | E | A | -2.5214 | |
| 35 | H | A | -2.4706 | |
| 36 | P | A | -2.2558 | |
| 37 | D | A | -2.9274 | |
| 38 | D | A | -2.8479 | |
| 39 | P | A | -1.7126 | |
| 40 | D | A | -2.0334 | |
| 41 | E | A | -1.6065 | |
| 42 | I | A | 0.0000 | |
| 43 | S | A | 0.0000 | |
| 44 | F | A | 0.6709 | |
| 45 | K | A | -0.5968 | |
| 46 | I | A | 0.0000 | |
| 47 | W | A | -0.1196 | |
| 48 | D | A | -1.8846 | |
| 49 | F | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | G | A | -2.1222 | |
| 52 | E | A | -3.0840 | |
| 53 | E | A | -2.4901 | |
| 54 | N | A | -2.4406 | |
| 55 | S | A | -0.9743 | |
| 56 | M | A | 0.2070 | |
| 57 | E | A | -1.1155 | |
| 58 | A | A | 0.0000 | |
| 59 | M | A | -0.1741 | |
| 60 | L | A | 0.5405 | |
| 61 | F | A | -0.2959 | |
| 62 | A | A | 0.0000 | |
| 63 | A | A | -0.8231 | |
| 64 | K | A | -2.1372 | |
| 65 | V | A | 0.0000 | |
| 66 | S | A | 0.0000 | |
| 67 | D | A | -2.9261 | |
| 68 | K | A | -2.6473 | |
| 69 | I | A | 0.0000 | |
| 70 | F | A | -1.6280 | |
| 71 | E | A | -2.7321 | |
| 72 | I | A | -1.4254 | |
| 73 | A | A | -1.9022 | |
| 74 | E | A | -2.2910 | |
| 75 | S | A | -1.3537 |