Project name: query_structure

Status: done

Started: 2026-03-16 23:18:14
Settings
Chain sequence(s) A: GCIAEDYGRCTWGGTPCCRGRPCRCYGRGDNDLRCECT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:23)
Show buried residues

Minimal score value
-3.887
Maximal score value
0.8495
Average score
-1.5632
Total score value
-59.4002

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.2419
2 C A 0.4386
3 I A 0.8495
4 A A -1.0464
5 E A -1.8570
6 D A -1.8407
7 Y A -0.8734
8 G A -1.7110
9 R A -2.3936
10 C A 0.0000
11 T A -0.4819
12 W A 0.6181
13 G A -0.0678
14 G A -0.6022
15 T A -0.7760
16 P A -1.4036
17 C A 0.0000
18 C A 0.0000
19 R A -2.4331
20 G A -2.3186
21 R A -3.0513
22 P A -2.0268
23 C A -2.0331
24 R A -2.6131
25 C A -1.5065
26 Y A -1.7362
27 G A -2.6573
28 R A -3.5761
29 G A -3.1296
30 D A -3.4604
31 N A -3.6466
32 D A -3.8870
33 L A -2.6410
34 R A -2.8090
35 C A 0.0000
36 E A -2.2901
37 C A -1.4939
38 T A -1.1850
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Laboratory of Theory of Biopolymers 2018