| Chain sequence(s) |
A: GCIAEDYGRCTWGGTPCCRGRPCRCYGRGDNDLRCECT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:22)
[INFO] Main: Simulation completed successfully. (00:00:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.2419 | |
| 2 | C | A | 0.4386 | |
| 3 | I | A | 0.8495 | |
| 4 | A | A | -1.0464 | |
| 5 | E | A | -1.8570 | |
| 6 | D | A | -1.8407 | |
| 7 | Y | A | -0.8734 | |
| 8 | G | A | -1.7110 | |
| 9 | R | A | -2.3936 | |
| 10 | C | A | 0.0000 | |
| 11 | T | A | -0.4819 | |
| 12 | W | A | 0.6181 | |
| 13 | G | A | -0.0678 | |
| 14 | G | A | -0.6022 | |
| 15 | T | A | -0.7760 | |
| 16 | P | A | -1.4036 | |
| 17 | C | A | 0.0000 | |
| 18 | C | A | 0.0000 | |
| 19 | R | A | -2.4331 | |
| 20 | G | A | -2.3186 | |
| 21 | R | A | -3.0513 | |
| 22 | P | A | -2.0268 | |
| 23 | C | A | -2.0331 | |
| 24 | R | A | -2.6131 | |
| 25 | C | A | -1.5065 | |
| 26 | Y | A | -1.7362 | |
| 27 | G | A | -2.6573 | |
| 28 | R | A | -3.5761 | |
| 29 | G | A | -3.1296 | |
| 30 | D | A | -3.4604 | |
| 31 | N | A | -3.6466 | |
| 32 | D | A | -3.8870 | |
| 33 | L | A | -2.6410 | |
| 34 | R | A | -2.8090 | |
| 35 | C | A | 0.0000 | |
| 36 | E | A | -2.2901 | |
| 37 | C | A | -1.4939 | |
| 38 | T | A | -1.1850 |