| Chain sequence(s) |
A: MKGNRDVINQLNQVLYHHLTAINQYFLHSRMFNDWGIEQLGSAEYKESIRQMKHADKIIERILFLEGLPNLQHLGKLYIGQHTEEVLQCDIRKVKENIEAIQKAVALAETEQDYVTRDLVQEILEKEEEYWDWLDTQIDLIGSVGIENYIQSQM
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:52)
[INFO] Main: Simulation completed successfully. (00:03:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.3036 | |
| 2 | K | A | -1.7181 | |
| 3 | G | A | 0.0000 | |
| 4 | N | A | -2.8499 | |
| 5 | R | A | -3.5979 | |
| 6 | D | A | -3.1940 | |
| 7 | V | A | 0.0000 | |
| 8 | I | A | 0.0000 | |
| 9 | N | A | -2.0001 | |
| 10 | Q | A | 0.0000 | |
| 11 | L | A | 0.0000 | |
| 12 | N | A | -0.4884 | |
| 13 | Q | A | -1.0036 | |
| 14 | V | A | 0.0000 | |
| 15 | L | A | 0.0000 | |
| 16 | Y | A | 0.2933 | |
| 17 | H | A | -0.3475 | |
| 18 | H | A | 0.0000 | |
| 19 | L | A | 0.2832 | |
| 20 | T | A | 0.0000 | |
| 21 | A | A | 0.0000 | |
| 22 | I | A | 0.3373 | |
| 23 | N | A | 0.1090 | |
| 24 | Q | A | 0.0000 | |
| 25 | Y | A | 0.0000 | |
| 26 | F | A | 0.5773 | |
| 27 | L | A | 0.3378 | |
| 28 | H | A | 0.0000 | |
| 29 | S | A | 0.0000 | |
| 30 | R | A | -2.2493 | |
| 31 | M | A | -1.7761 | |
| 32 | F | A | 0.0000 | |
| 33 | N | A | -2.8283 | |
| 34 | D | A | -2.8168 | |
| 35 | W | A | -1.3611 | |
| 36 | G | A | -1.7105 | |
| 37 | I | A | 0.0000 | |
| 38 | E | A | -2.7881 | |
| 39 | Q | A | -1.7257 | |
| 40 | L | A | 0.0000 | |
| 41 | G | A | 0.0000 | |
| 42 | S | A | -1.3957 | |
| 43 | A | A | -0.8287 | |
| 44 | E | A | 0.0000 | |
| 45 | Y | A | -0.0999 | |
| 46 | K | A | -1.0734 | |
| 47 | E | A | 0.0000 | |
| 48 | S | A | 0.0000 | |
| 49 | I | A | -0.0182 | |
| 50 | R | A | -1.1169 | |
| 51 | Q | A | 0.0000 | |
| 52 | M | A | -1.1397 | |
| 53 | K | A | -2.2579 | |
| 54 | H | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | D | A | -3.0544 | |
| 57 | K | A | -2.4860 | |
| 58 | I | A | 0.0000 | |
| 59 | I | A | -0.6715 | |
| 60 | E | A | -1.6529 | |
| 61 | R | A | 0.0000 | |
| 62 | I | A | 0.0000 | |
| 63 | L | A | 1.3539 | |
| 64 | F | A | 1.4614 | |
| 65 | L | A | 0.0000 | |
| 66 | E | A | -1.1809 | |
| 67 | G | A | -0.2738 | |
| 68 | L | A | 1.6180 | |
| 69 | P | A | 0.4760 | |
| 70 | N | A | 0.0991 | |
| 71 | L | A | 0.9921 | |
| 72 | Q | A | -0.7002 | |
| 73 | H | A | -0.6865 | |
| 74 | L | A | 0.4454 | |
| 75 | G | A | -0.4917 | |
| 76 | K | A | -1.2815 | |
| 77 | L | A | -0.1088 | |
| 78 | Y | A | -0.4120 | |
| 79 | I | A | -0.0596 | |
| 80 | G | A | 0.0000 | |
| 81 | Q | A | -2.0542 | |
| 82 | H | A | -2.2936 | |
| 83 | T | A | 0.0000 | |
| 84 | E | A | -2.6514 | |
| 85 | E | A | -2.8953 | |
| 86 | V | A | 0.0000 | |
| 87 | L | A | 0.0000 | |
| 88 | Q | A | -2.2548 | |
| 89 | C | A | -1.2302 | |
| 90 | D | A | 0.0000 | |
| 91 | I | A | -1.4837 | |
| 92 | R | A | -1.8714 | |
| 93 | K | A | 0.0000 | |
| 94 | V | A | 0.0000 | |
| 95 | K | A | -2.0212 | |
| 96 | E | A | -1.7681 | |
| 97 | N | A | 0.0000 | |
| 98 | I | A | -2.1605 | |
| 99 | E | A | -2.8572 | |
| 100 | A | A | 0.0000 | |
| 101 | I | A | 0.0000 | |
| 102 | Q | A | -2.3076 | |
| 103 | K | A | -2.5049 | |
| 104 | A | A | 0.0000 | |
| 105 | V | A | -1.2844 | |
| 106 | A | A | -1.3419 | |
| 107 | L | A | -1.5533 | |
| 108 | A | A | 0.0000 | |
| 109 | E | A | -1.6901 | |
| 110 | T | A | -1.3158 | |
| 111 | E | A | -2.1830 | |
| 112 | Q | A | -1.7193 | |
| 113 | D | A | -0.7234 | |
| 114 | Y | A | 0.4559 | |
| 115 | V | A | 1.2529 | |
| 116 | T | A | 0.0000 | |
| 117 | R | A | -1.1248 | |
| 118 | D | A | -1.6840 | |
| 119 | L | A | -0.9233 | |
| 120 | V | A | 0.0000 | |
| 121 | Q | A | -2.4200 | |
| 122 | E | A | -3.1393 | |
| 123 | I | A | 0.0000 | |
| 124 | L | A | 0.0000 | |
| 125 | E | A | -3.7193 | |
| 126 | K | A | -3.2475 | |
| 127 | E | A | 0.0000 | |
| 128 | E | A | -3.5752 | |
| 129 | E | A | -3.6349 | |
| 130 | Y | A | 0.0000 | |
| 131 | W | A | -2.2453 | |
| 132 | D | A | -2.8543 | |
| 133 | W | A | -1.4925 | |
| 134 | L | A | 0.0000 | |
| 135 | D | A | -1.7388 | |
| 136 | T | A | -1.2046 | |
| 137 | Q | A | 0.0000 | |
| 138 | I | A | -1.1444 | |
| 139 | D | A | -1.6253 | |
| 140 | L | A | -0.4046 | |
| 141 | I | A | 0.0000 | |
| 142 | G | A | -0.6284 | |
| 143 | S | A | -0.3656 | |
| 144 | V | A | -0.0854 | |
| 145 | G | A | -0.6703 | |
| 146 | I | A | -1.0198 | |
| 147 | E | A | -2.3736 | |
| 148 | N | A | -2.1992 | |
| 149 | Y | A | 0.0000 | |
| 150 | I | A | -1.4308 | |
| 151 | Q | A | -1.7858 | |
| 152 | S | A | -1.1053 | |
| 153 | Q | A | -1.0437 | |
| 154 | M | A | -0.4618 |