Project name: ABFerritin

Status: done

Started: 2026-03-05 12:14:24
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Chain sequence(s) A: MKGNRDVINQLNQVLYHHLTAINQYFLHSRMFNDWGIEQLGSAEYKESIRQMKHADKIIERILFLEGLPNLQHLGKLYIGQHTEEVLQCDIRKVKENIEAIQKAVALAETEQDYVTRDLVQEILEKEEEYWDWLDTQIDLIGSVGIENYIQSQM
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:54)
Show buried residues

Minimal score value
-3.7193
Maximal score value
1.618
Average score
-0.8738
Total score value
-134.5625

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.3036
2 K A -1.7181
3 G A 0.0000
4 N A -2.8499
5 R A -3.5979
6 D A -3.1940
7 V A 0.0000
8 I A 0.0000
9 N A -2.0001
10 Q A 0.0000
11 L A 0.0000
12 N A -0.4884
13 Q A -1.0036
14 V A 0.0000
15 L A 0.0000
16 Y A 0.2933
17 H A -0.3475
18 H A 0.0000
19 L A 0.2832
20 T A 0.0000
21 A A 0.0000
22 I A 0.3373
23 N A 0.1090
24 Q A 0.0000
25 Y A 0.0000
26 F A 0.5773
27 L A 0.3378
28 H A 0.0000
29 S A 0.0000
30 R A -2.2493
31 M A -1.7761
32 F A 0.0000
33 N A -2.8283
34 D A -2.8168
35 W A -1.3611
36 G A -1.7105
37 I A 0.0000
38 E A -2.7881
39 Q A -1.7257
40 L A 0.0000
41 G A 0.0000
42 S A -1.3957
43 A A -0.8287
44 E A 0.0000
45 Y A -0.0999
46 K A -1.0734
47 E A 0.0000
48 S A 0.0000
49 I A -0.0182
50 R A -1.1169
51 Q A 0.0000
52 M A -1.1397
53 K A -2.2579
54 H A 0.0000
55 A A 0.0000
56 D A -3.0544
57 K A -2.4860
58 I A 0.0000
59 I A -0.6715
60 E A -1.6529
61 R A 0.0000
62 I A 0.0000
63 L A 1.3539
64 F A 1.4614
65 L A 0.0000
66 E A -1.1809
67 G A -0.2738
68 L A 1.6180
69 P A 0.4760
70 N A 0.0991
71 L A 0.9921
72 Q A -0.7002
73 H A -0.6865
74 L A 0.4454
75 G A -0.4917
76 K A -1.2815
77 L A -0.1088
78 Y A -0.4120
79 I A -0.0596
80 G A 0.0000
81 Q A -2.0542
82 H A -2.2936
83 T A 0.0000
84 E A -2.6514
85 E A -2.8953
86 V A 0.0000
87 L A 0.0000
88 Q A -2.2548
89 C A -1.2302
90 D A 0.0000
91 I A -1.4837
92 R A -1.8714
93 K A 0.0000
94 V A 0.0000
95 K A -2.0212
96 E A -1.7681
97 N A 0.0000
98 I A -2.1605
99 E A -2.8572
100 A A 0.0000
101 I A 0.0000
102 Q A -2.3076
103 K A -2.5049
104 A A 0.0000
105 V A -1.2844
106 A A -1.3419
107 L A -1.5533
108 A A 0.0000
109 E A -1.6901
110 T A -1.3158
111 E A -2.1830
112 Q A -1.7193
113 D A -0.7234
114 Y A 0.4559
115 V A 1.2529
116 T A 0.0000
117 R A -1.1248
118 D A -1.6840
119 L A -0.9233
120 V A 0.0000
121 Q A -2.4200
122 E A -3.1393
123 I A 0.0000
124 L A 0.0000
125 E A -3.7193
126 K A -3.2475
127 E A 0.0000
128 E A -3.5752
129 E A -3.6349
130 Y A 0.0000
131 W A -2.2453
132 D A -2.8543
133 W A -1.4925
134 L A 0.0000
135 D A -1.7388
136 T A -1.2046
137 Q A 0.0000
138 I A -1.1444
139 D A -1.6253
140 L A -0.4046
141 I A 0.0000
142 G A -0.6284
143 S A -0.3656
144 V A -0.0854
145 G A -0.6703
146 I A -1.0198
147 E A -2.3736
148 N A -2.1992
149 Y A 0.0000
150 I A -1.4308
151 Q A -1.7858
152 S A -1.1053
153 Q A -1.0437
154 M A -0.4618
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Laboratory of Theory of Biopolymers 2018