| Chain sequence(s) |
A: MSHHHHHHSGSEASKLVENLLKVLELEEELLKEENSSLLETLENFVLYLAMVALTLFMLALILRYAHLMGELVDIPKLREVLEKLEKFIEKLKKLLEEKGKKWTTSKGEEVELSDELLKKIEELIETLEEYLEVFSEIVYSTPVDQPIPEEDIEKLIALLPKLGEVFDEVIDLVIESFPDLPDEVVILLYRSRWLFERSLRVLGEGDPGWLRYLVYRGMWRIMDILEFITGKKIRYRIDHKKQEFVIESVENS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:04)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:04)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:04)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:04)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:04)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:10)
[INFO] Main: Simulation completed successfully. (00:08:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5599 | |
| 2 | S | A | -0.6143 | |
| 3 | H | A | -1.7422 | |
| 4 | H | A | -2.3355 | |
| 5 | H | A | -2.7368 | |
| 6 | H | A | -2.7480 | |
| 7 | H | A | -2.5192 | |
| 8 | H | A | -2.1227 | |
| 9 | S | A | -1.4520 | |
| 10 | G | A | -1.2865 | |
| 11 | S | A | -0.8704 | |
| 12 | E | A | -1.4631 | |
| 13 | A | A | 0.0000 | |
| 14 | S | A | -1.0070 | |
| 15 | K | A | -1.7156 | |
| 16 | L | A | 0.0000 | |
| 17 | V | A | 0.0000 | |
| 18 | E | A | -1.7687 | |
| 19 | N | A | 0.0000 | |
| 20 | L | A | 0.0000 | |
| 21 | L | A | -1.2066 | |
| 22 | K | A | -1.0818 | |
| 23 | V | A | 0.0000 | |
| 24 | L | A | 0.0000 | |
| 25 | E | A | -2.2020 | |
| 26 | L | A | -1.4266 | |
| 27 | E | A | 0.0000 | |
| 28 | E | A | -2.9079 | |
| 29 | E | A | -3.0436 | |
| 30 | L | A | -1.8813 | |
| 31 | L | A | 0.0000 | |
| 32 | K | A | -3.2742 | |
| 33 | E | A | -3.5960 | |
| 34 | E | A | -3.1793 | |
| 35 | N | A | -2.4256 | |
| 36 | S | A | -1.8521 | |
| 37 | S | A | -1.1315 | |
| 38 | L | A | -0.6177 | |
| 39 | L | A | 0.0000 | |
| 40 | E | A | -0.9203 | |
| 41 | T | A | -1.0565 | |
| 42 | L | A | 0.0000 | |
| 43 | E | A | 0.0000 | |
| 44 | N | A | 0.0000 | |
| 45 | F | A | 0.0000 | |
| 46 | V | A | 0.0000 | |
| 47 | L | A | 0.0000 | |
| 48 | Y | A | 0.0000 | |
| 49 | L | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | M | A | 0.0000 | |
| 52 | V | A | 0.0000 | |
| 53 | A | A | 0.0000 | |
| 54 | L | A | 0.0000 | |
| 55 | T | A | 0.0000 | |
| 56 | L | A | 0.0000 | |
| 57 | F | A | 0.0000 | |
| 58 | M | A | 0.0000 | |
| 59 | L | A | 0.0000 | |
| 60 | A | A | 0.0000 | |
| 61 | L | A | 0.0000 | |
| 62 | I | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | R | A | -0.9185 | |
| 65 | Y | A | 0.0000 | |
| 66 | A | A | 0.0000 | |
| 67 | H | A | -0.4859 | |
| 68 | L | A | 0.0205 | |
| 69 | M | A | 0.2633 | |
| 70 | G | A | -0.1913 | |
| 71 | E | A | -0.4067 | |
| 72 | L | A | -0.2724 | |
| 73 | V | A | 0.0000 | |
| 74 | D | A | -0.9266 | |
| 75 | I | A | 0.0000 | |
| 76 | P | A | -0.5508 | |
| 77 | K | A | -1.6459 | |
| 78 | L | A | 0.0000 | |
| 79 | R | A | -1.3986 | |
| 80 | E | A | -2.3993 | |
| 81 | V | A | 0.0000 | |
| 82 | L | A | 0.0000 | |
| 83 | E | A | -2.8415 | |
| 84 | K | A | -2.5943 | |
| 85 | L | A | 0.0000 | |
| 86 | E | A | -4.2760 | |
| 87 | K | A | -3.7466 | |
| 88 | F | A | 0.0000 | |
| 89 | I | A | 0.0000 | |
| 90 | E | A | -3.8939 | |
| 91 | K | A | -2.7817 | |
| 92 | L | A | 0.0000 | |
| 93 | K | A | -3.6187 | |
| 94 | K | A | -3.4606 | |
| 95 | L | A | -2.5610 | |
| 96 | L | A | 0.0000 | |
| 97 | E | A | -3.6999 | |
| 98 | E | A | -3.5775 | |
| 99 | K | A | -2.5704 | |
| 100 | G | A | -2.3506 | |
| 101 | K | A | -2.6108 | |
| 102 | K | A | -2.8250 | |
| 103 | W | A | 0.0000 | |
| 104 | T | A | -2.4381 | |
| 105 | T | A | -2.1215 | |
| 106 | S | A | -1.7417 | |
| 107 | K | A | -2.8003 | |
| 108 | G | A | -2.6483 | |
| 109 | E | A | -3.4252 | |
| 110 | E | A | -3.5737 | |
| 111 | V | A | -2.4493 | |
| 112 | E | A | -2.9535 | |
| 113 | L | A | 0.0000 | |
| 114 | S | A | -2.4079 | |
| 115 | D | A | -3.4677 | |
| 116 | E | A | -3.4001 | |
| 117 | L | A | 0.0000 | |
| 118 | L | A | -2.7412 | |
| 119 | K | A | -3.6272 | |
| 120 | K | A | -3.1618 | |
| 121 | I | A | 0.0000 | |
| 122 | E | A | -3.4111 | |
| 123 | E | A | -3.0533 | |
| 124 | L | A | 0.0000 | |
| 125 | I | A | 0.0000 | |
| 126 | E | A | -3.7932 | |
| 127 | T | A | -2.9260 | |
| 128 | L | A | 0.0000 | |
| 129 | E | A | -4.5486 | |
| 130 | E | A | -3.7155 | |
| 131 | Y | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | E | A | -3.5596 | |
| 134 | V | A | -2.1625 | |
| 135 | F | A | 0.0000 | |
| 136 | S | A | -1.7309 | |
| 137 | E | A | -1.9110 | |
| 138 | I | A | 0.0000 | |
| 139 | V | A | 0.0000 | |
| 140 | Y | A | 0.6776 | |
| 141 | S | A | 0.0360 | |
| 142 | T | A | 0.0000 | |
| 143 | P | A | -0.2983 | |
| 144 | V | A | 0.1807 | |
| 145 | D | A | -1.7331 | |
| 146 | Q | A | -1.7631 | |
| 147 | P | A | -1.2874 | |
| 148 | I | A | 0.0000 | |
| 149 | P | A | -2.2577 | |
| 150 | E | A | -3.4078 | |
| 151 | E | A | -3.7720 | |
| 152 | D | A | -3.0038 | |
| 153 | I | A | 0.0000 | |
| 154 | E | A | -3.5795 | |
| 155 | K | A | -2.8271 | |
| 156 | L | A | 0.0000 | |
| 157 | I | A | -0.9708 | |
| 158 | A | A | -0.8135 | |
| 159 | L | A | -0.6536 | |
| 160 | L | A | 0.0000 | |
| 161 | P | A | -1.2385 | |
| 162 | K | A | -1.8790 | |
| 163 | L | A | 0.0000 | |
| 164 | G | A | 0.0000 | |
| 165 | E | A | -3.1304 | |
| 166 | V | A | 0.0000 | |
| 167 | F | A | 0.0000 | |
| 168 | D | A | -2.6080 | |
| 169 | E | A | -2.8930 | |
| 170 | V | A | 0.0000 | |
| 171 | I | A | 0.0000 | |
| 172 | D | A | -2.4664 | |
| 173 | L | A | -1.7841 | |
| 174 | V | A | 0.0000 | |
| 175 | I | A | -1.1415 | |
| 176 | E | A | -2.1927 | |
| 177 | S | A | -1.3788 | |
| 178 | F | A | -1.0480 | |
| 179 | P | A | -1.5577 | |
| 180 | D | A | -2.2189 | |
| 181 | L | A | -1.7808 | |
| 182 | P | A | -1.9137 | |
| 183 | D | A | -2.5014 | |
| 184 | E | A | -2.1246 | |
| 185 | V | A | 0.0000 | |
| 186 | V | A | -0.2681 | |
| 187 | I | A | 0.1488 | |
| 188 | L | A | 0.0000 | |
| 189 | L | A | 0.0000 | |
| 190 | Y | A | 0.3068 | |
| 191 | R | A | -0.4100 | |
| 192 | S | A | 0.0000 | |
| 193 | R | A | -0.9679 | |
| 194 | W | A | -0.7054 | |
| 195 | L | A | 0.0000 | |
| 196 | F | A | 0.0000 | |
| 197 | E | A | -2.5552 | |
| 198 | R | A | -1.7658 | |
| 199 | S | A | 0.0000 | |
| 200 | L | A | -1.4422 | |
| 201 | R | A | -2.4641 | |
| 202 | V | A | 0.0000 | |
| 203 | L | A | 0.0000 | |
| 204 | G | A | -2.0649 | |
| 205 | E | A | -2.6495 | |
| 206 | G | A | -1.7739 | |
| 207 | D | A | -1.6987 | |
| 208 | P | A | -0.6676 | |
| 209 | G | A | -0.3561 | |
| 210 | W | A | -0.2378 | |
| 211 | L | A | 0.0000 | |
| 212 | R | A | -0.4473 | |
| 213 | Y | A | 0.6456 | |
| 214 | L | A | 0.0000 | |
| 215 | V | A | 0.0000 | |
| 216 | Y | A | 0.0000 | |
| 217 | R | A | -0.0819 | |
| 218 | G | A | 0.0000 | |
| 219 | M | A | 0.0000 | |
| 220 | W | A | 0.2263 | |
| 221 | R | A | -0.3955 | |
| 222 | I | A | 0.0000 | |
| 223 | M | A | 0.0000 | |
| 224 | D | A | -0.6786 | |
| 225 | I | A | 0.0000 | |
| 226 | L | A | 0.0000 | |
| 227 | E | A | -1.2427 | |
| 228 | F | A | -0.5218 | |
| 229 | I | A | 0.0000 | |
| 230 | T | A | 0.0000 | |
| 231 | G | A | -1.2888 | |
| 232 | K | A | -2.2076 | |
| 233 | K | A | -2.4494 | |
| 234 | I | A | 0.0000 | |
| 235 | R | A | -2.7232 | |
| 236 | Y | A | -1.6035 | |
| 237 | R | A | -2.3023 | |
| 238 | I | A | 0.0000 | |
| 239 | D | A | -2.4990 | |
| 240 | H | A | -2.9906 | |
| 241 | K | A | -3.3048 | |
| 242 | K | A | -3.4087 | |
| 243 | Q | A | -2.7075 | |
| 244 | E | A | -2.5386 | |
| 245 | F | A | 0.0000 | |
| 246 | V | A | -1.0468 | |
| 247 | I | A | -0.8858 | |
| 248 | E | A | -2.2654 | |
| 249 | S | A | -1.4288 | |
| 250 | V | A | -1.3237 | |
| 251 | E | A | -2.7320 | |
| 252 | N | A | -2.4509 | |
| 253 | S | A | -1.6962 |