| Chain sequence(s) |
A: KLKSCPDGYTSGVECRFRGYTCANDGCWRVCSFTTCSGWMPASDTY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:53)
[INFO] Main: Simulation completed successfully. (00:00:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.3663 | |
| 2 | L | A | -0.1618 | |
| 3 | K | A | -1.7645 | |
| 4 | S | A | -1.2972 | |
| 5 | C | A | 0.0000 | |
| 6 | P | A | -1.7150 | |
| 7 | D | A | -2.5216 | |
| 8 | G | A | -1.5206 | |
| 9 | Y | A | -1.0667 | |
| 10 | T | A | -0.5616 | |
| 11 | S | A | -0.8805 | |
| 12 | G | A | 0.0000 | |
| 13 | V | A | -0.5372 | |
| 14 | E | A | -1.0012 | |
| 15 | C | A | 0.0000 | |
| 16 | R | A | -1.5014 | |
| 17 | F | A | 0.0881 | |
| 18 | R | A | -1.2101 | |
| 19 | G | A | -0.4674 | |
| 20 | Y | A | 0.1152 | |
| 21 | T | A | -0.0322 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -1.2150 | |
| 24 | N | A | -1.9814 | |
| 25 | D | A | -2.3014 | |
| 26 | G | A | 0.0000 | |
| 27 | C | A | 0.0000 | |
| 28 | W | A | -0.1310 | |
| 29 | R | A | -0.9408 | |
| 30 | V | A | 0.9364 | |
| 31 | C | A | 0.6058 | |
| 32 | S | A | 0.8795 | |
| 33 | F | A | 1.4133 | |
| 34 | T | A | 0.8989 | |
| 35 | T | A | 0.8786 | |
| 36 | C | A | 0.9218 | |
| 37 | S | A | 0.4311 | |
| 38 | G | A | 0.3084 | |
| 39 | W | A | 0.9143 | |
| 40 | M | A | 0.1677 | |
| 41 | P | A | -0.4038 | |
| 42 | A | A | -0.8407 | |
| 43 | S | A | -1.0828 | |
| 44 | D | A | -1.5198 | |
| 45 | T | A | -0.3467 | |
| 46 | Y | A | 0.6299 |