| Chain sequence(s) |
L: CPVDLNADKKIC
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:11)
[INFO] Main: Simulation completed successfully. (00:00:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 31 | C | L | 0.6867 | |
| 32 | P | L | 0.1955 | |
| 33 | V | L | 1.4019 | |
| 34 | D | L | -1.3489 | |
| 35 | L | L | 0.1206 | |
| 36 | N | L | -1.1462 | |
| 37 | A | L | -0.5258 | |
| 38 | D | L | -2.0888 | |
| 39 | K | L | -2.2727 | |
| 40 | K | L | -1.3178 | |
| 41 | I | L | 1.8902 | |
| 42 | C | L | 1.0969 |