| Chain sequence(s) |
A: AVILWRRRRRR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15)
[INFO] Main: Simulation completed successfully. (00:00:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | A | A | 1.6966 | |
| 3 | V | A | 2.4024 | |
| 4 | I | A | 1.6798 | |
| 5 | L | A | 0.6725 | |
| 6 | W | A | -0.1297 | |
| 7 | R | A | -2.6885 | |
| 8 | R | A | -3.7970 | |
| 9 | R | A | -3.9072 | |
| 10 | R | A | -4.6584 | |
| 11 | R | A | -4.9184 | |
| 12 | R | A | -4.3575 |