| Chain sequence(s) |
H: QVQLVESGGGVVQPGGSLRLSCAASGNIFKIHYMGWSRQAPGKQRELVATLSSGGDTNIADSVKGRFTISRDNAKNTVYLQMNSLRAEDTAVYYCLVVGRPSDGHVAVNYWGQGTTVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05)
[INFO] Main: Simulation completed successfully. (00:01:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.7332 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.2532 | |
| 4 | L | H | 0.2232 | |
| 5 | V | H | 1.2361 | |
| 6 | E | H | 0.2704 | |
| 7 | S | H | -0.2963 | |
| 8 | G | H | -0.9828 | |
| 9 | G | H | -0.3358 | |
| 11 | G | H | 0.4166 | |
| 12 | V | H | 1.4171 | |
| 13 | V | H | 0.1445 | |
| 14 | Q | H | -1.2196 | |
| 15 | P | H | -1.4298 | |
| 16 | G | H | -1.2893 | |
| 17 | G | H | -0.8578 | |
| 18 | S | H | -0.9151 | |
| 19 | L | H | -0.6446 | |
| 20 | R | H | -1.7106 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3153 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.1033 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.0712 | |
| 27 | G | H | -1.3793 | |
| 28 | N | H | -1.4157 | |
| 29 | I | H | -0.1282 | |
| 30 | F | H | 0.8029 | |
| 35 | K | H | -0.8712 | |
| 36 | I | H | -0.3355 | |
| 37 | H | H | -0.5244 | |
| 38 | Y | H | -0.4073 | |
| 39 | M | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | S | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.4564 | |
| 45 | A | H | -1.5193 | |
| 46 | P | H | -1.2711 | |
| 47 | G | H | -1.7973 | |
| 48 | K | H | -2.9360 | |
| 49 | Q | H | -2.6912 | |
| 50 | R | H | -1.9936 | |
| 51 | E | H | -1.2072 | |
| 52 | L | H | -0.2089 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | T | H | -0.5514 | |
| 56 | L | H | 0.0000 | |
| 57 | S | H | -1.1078 | |
| 58 | S | H | -1.2469 | |
| 59 | G | H | -1.2887 | |
| 63 | G | H | -1.6655 | |
| 64 | D | H | -2.4518 | |
| 65 | T | H | -1.6232 | |
| 66 | N | H | -1.8189 | |
| 67 | I | H | -1.1512 | |
| 68 | A | H | -1.4027 | |
| 69 | D | H | -2.5329 | |
| 70 | S | H | -1.7798 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.7228 | |
| 74 | G | H | -1.7086 | |
| 75 | R | H | -1.5805 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.9186 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.8154 | |
| 80 | R | H | -1.3359 | |
| 81 | D | H | -1.7114 | |
| 82 | N | H | -2.1519 | |
| 83 | A | H | -1.5966 | |
| 84 | K | H | -2.3491 | |
| 85 | N | H | -1.6504 | |
| 86 | T | H | 0.0000 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.5862 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.1110 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2569 | |
| 93 | S | H | -1.1271 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.0350 | |
| 96 | A | H | -1.5685 | |
| 97 | E | H | -2.1720 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.5355 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.0052 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.1474 | |
| 104 | C | H | 0.0000 | |
| 105 | L | H | 0.0000 | |
| 106 | V | H | 0.0000 | |
| 107 | V | H | -0.0424 | |
| 108 | G | H | 0.0000 | |
| 109 | R | H | -0.9665 | |
| 110 | P | H | -0.8967 | |
| 111 | S | H | -1.3684 | |
| 111A | D | H | -2.3114 | |
| 112A | G | H | -1.5373 | |
| 112 | H | H | -1.0587 | |
| 113 | V | H | 0.8737 | |
| 114 | A | H | 0.4455 | |
| 115 | V | H | 0.8774 | |
| 116 | N | H | -0.0203 | |
| 117 | Y | H | -0.1458 | |
| 118 | W | H | 0.4419 | |
| 119 | G | H | -0.1113 | |
| 120 | Q | H | -0.8059 | |
| 121 | G | H | -0.2542 | |
| 122 | T | H | -0.1909 | |
| 123 | T | H | 0.0354 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.1044 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.3853 | |
| 128 | S | H | -0.4522 |