Project name: 2510-20.pdb

Status: done

Started: 2026-03-12 01:22:51
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Chain sequence(s) H: QVQLVESGGGVVQPGGSLRLSCAASGNIFKIHYMGWSRQAPGKQRELVATLSSGGDTNIADSVKGRFTISRDNAKNTVYLQMNSLRAEDTAVYYCLVVGRPSDGHVAVNYWGQGTTVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:05)
Show buried residues

Minimal score value
-2.936
Maximal score value
1.4171
Average score
-0.7022
Total score value
-84.9707

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.7332
2 V H 0.0000
3 Q H -1.2532
4 L H 0.2232
5 V H 1.2361
6 E H 0.2704
7 S H -0.2963
8 G H -0.9828
9 G H -0.3358
11 G H 0.4166
12 V H 1.4171
13 V H 0.1445
14 Q H -1.2196
15 P H -1.4298
16 G H -1.2893
17 G H -0.8578
18 S H -0.9151
19 L H -0.6446
20 R H -1.7106
21 L H 0.0000
22 S H -0.3153
23 C H 0.0000
24 A H -0.1033
25 A H 0.0000
26 S H -1.0712
27 G H -1.3793
28 N H -1.4157
29 I H -0.1282
30 F H 0.8029
35 K H -0.8712
36 I H -0.3355
37 H H -0.5244
38 Y H -0.4073
39 M H 0.0000
40 G H 0.0000
41 W H 0.0000
42 S H 0.0000
43 R H 0.0000
44 Q H -1.4564
45 A H -1.5193
46 P H -1.2711
47 G H -1.7973
48 K H -2.9360
49 Q H -2.6912
50 R H -1.9936
51 E H -1.2072
52 L H -0.2089
53 V H 0.0000
54 A H 0.0000
55 T H -0.5514
56 L H 0.0000
57 S H -1.1078
58 S H -1.2469
59 G H -1.2887
63 G H -1.6655
64 D H -2.4518
65 T H -1.6232
66 N H -1.8189
67 I H -1.1512
68 A H -1.4027
69 D H -2.5329
70 S H -1.7798
71 V H 0.0000
72 K H -2.7228
74 G H -1.7086
75 R H -1.5805
76 F H 0.0000
77 T H -0.9186
78 I H 0.0000
79 S H -0.8154
80 R H -1.3359
81 D H -1.7114
82 N H -2.1519
83 A H -1.5966
84 K H -2.3491
85 N H -1.6504
86 T H 0.0000
87 V H 0.0000
88 Y H -0.5862
89 L H 0.0000
90 Q H -1.1110
91 M H 0.0000
92 N H -1.2569
93 S H -1.1271
94 L H 0.0000
95 R H -2.0350
96 A H -1.5685
97 E H -2.1720
98 D H 0.0000
99 T H -0.5355
100 A H 0.0000
101 V H -0.0052
102 Y H 0.0000
103 Y H 0.1474
104 C H 0.0000
105 L H 0.0000
106 V H 0.0000
107 V H -0.0424
108 G H 0.0000
109 R H -0.9665
110 P H -0.8967
111 S H -1.3684
111A D H -2.3114
112A G H -1.5373
112 H H -1.0587
113 V H 0.8737
114 A H 0.4455
115 V H 0.8774
116 N H -0.0203
117 Y H -0.1458
118 W H 0.4419
119 G H -0.1113
120 Q H -0.8059
121 G H -0.2542
122 T H -0.1909
123 T H 0.0354
124 V H 0.0000
125 T H 0.1044
126 V H 0.0000
127 S H -0.3853
128 S H -0.4522
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Laboratory of Theory of Biopolymers 2018