| Chain sequence(s) |
A: CGPGRFQCESGQCIPATWVCDGENDCVDDSDEKSCATTAPTCPPDQFTCNSGRCVPLNWLCDGVNDCADSSDEPPECQPRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:03)
[INFO] Main: Simulation completed successfully. (00:01:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | -0.1870 | |
| 2 | G | A | -0.7113 | |
| 3 | P | A | -0.8268 | |
| 4 | G | A | -1.1511 | |
| 5 | R | A | -1.2574 | |
| 6 | F | A | -0.7917 | |
| 7 | Q | A | -1.7019 | |
| 8 | C | A | 0.0000 | |
| 9 | E | A | -2.7147 | |
| 10 | S | A | -1.6520 | |
| 11 | G | A | -1.4210 | |
| 12 | Q | A | -1.1397 | |
| 13 | C | A | -0.6818 | |
| 14 | I | A | 0.0000 | |
| 15 | P | A | -0.3232 | |
| 16 | A | A | -0.4342 | |
| 17 | T | A | -0.1889 | |
| 18 | W | A | -0.4659 | |
| 19 | V | A | -1.0118 | |
| 20 | C | A | -1.6424 | |
| 21 | D | A | -2.5397 | |
| 22 | G | A | -2.4421 | |
| 23 | E | A | -3.3015 | |
| 24 | N | A | -2.9929 | |
| 25 | D | A | -1.6716 | |
| 26 | C | A | 0.0000 | |
| 27 | V | A | 0.0768 | |
| 28 | D | A | -2.0284 | |
| 29 | D | A | -2.3548 | |
| 30 | S | A | 0.0000 | |
| 31 | D | A | 0.0000 | |
| 32 | E | A | -2.5623 | |
| 33 | K | A | -2.5877 | |
| 34 | S | A | -1.2901 | |
| 35 | C | A | -0.9288 | |
| 36 | A | A | -0.5486 | |
| 37 | T | A | -0.2821 | |
| 38 | T | A | -0.1032 | |
| 39 | A | A | -0.5345 | |
| 40 | P | A | -0.9479 | |
| 41 | T | A | -0.6149 | |
| 42 | C | A | -0.9720 | |
| 43 | P | A | -1.1051 | |
| 44 | P | A | -1.1704 | |
| 45 | D | A | -2.0259 | |
| 46 | Q | A | -1.1137 | |
| 47 | F | A | -0.4046 | |
| 48 | T | A | -0.7277 | |
| 49 | C | A | 0.0000 | |
| 50 | N | A | -1.9646 | |
| 51 | S | A | -1.7044 | |
| 52 | G | A | -1.6381 | |
| 53 | R | A | -2.2744 | |
| 54 | C | A | -0.9441 | |
| 55 | V | A | 0.0000 | |
| 56 | P | A | -0.4335 | |
| 57 | L | A | -0.3400 | |
| 58 | N | A | -1.1243 | |
| 59 | W | A | -0.1468 | |
| 60 | L | A | -0.0845 | |
| 61 | C | A | -1.4201 | |
| 62 | D | A | -2.0464 | |
| 63 | G | A | -1.2118 | |
| 64 | V | A | 0.0540 | |
| 65 | N | A | -1.1771 | |
| 66 | D | A | -0.9208 | |
| 67 | C | A | 0.0000 | |
| 68 | A | A | -1.2110 | |
| 69 | D | A | -1.6597 | |
| 70 | S | A | -1.0866 | |
| 71 | S | A | -1.2061 | |
| 72 | D | A | 0.0000 | |
| 73 | E | A | -1.2280 | |
| 74 | P | A | -1.2777 | |
| 75 | P | A | -1.3743 | |
| 76 | E | A | -2.2919 | |
| 77 | C | A | -2.0561 | |
| 78 | Q | A | -2.6258 | |
| 79 | P | A | -2.4033 | |
| 80 | R | A | -2.6045 | |
| 81 | T | A | -1.2230 |