Project name: KLD-12_20

Status: done

Started: 2026-06-25 03:18:57
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Chain sequence(s) A: KLDLKLDLKLDL
C: KLDLKLDLKLDL
B: KLDLKLDLKLDL
E: KLDLKLDLKLDL
D: KLDLKLDLKLDL
G: KLDLKLDLKLDL
F: KLDLKLDLKLDL
I: KLDLKLDLKLDL
H: KLDLKLDLKLDL
K: KLDLKLDLKLDL
J: KLDLKLDLKLDL
M: KLDLKLDLKLDL
L: KLDLKLDLKLDL
O: KLDLKLDLKLDL
N: KLDLKLDLKLDL
Q: KLDLKLDLKLDL
P: KLDLKLDLKLDL
S: KLDLKLDLKLDL
R: KLDLKLDLKLDL
T: KLDLKLDLKLDL
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:41:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:41:08)
Show buried residues

Minimal score value
-4.2663
Maximal score value
2.4648
Average score
-0.7878
Total score value
-189.0758

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -3.2218
2 L A 0.0000
3 D A -4.2663
4 L A 0.0000
5 K A -3.7253
6 L A 0.0000
7 D A -3.4254
8 L A 0.0000
9 K A -3.4746
10 L A 0.0000
11 D A -2.6685
12 L A 0.4165
1 K B -3.0501
2 L B 0.0000
3 D B -3.1126
4 L B 0.0000
5 K B -2.5855
6 L B 0.0000
7 D B -2.8713
8 L B 0.0000
9 K B -4.2188
10 L B 0.0000
11 D B -2.9046
12 L B 0.0169
1 K C -2.8198
2 L C 0.0000
3 D C -3.3278
4 L C 0.0000
5 K C -2.6661
6 L C 0.0000
7 D C -2.3031
8 L C 0.0000
9 K C -3.5349
10 L C 0.0000
11 D C -2.7011
12 L C 0.2974
1 K D -2.8979
2 L D 0.0000
3 D D -3.2160
4 L D 0.0000
5 K D -3.2619
6 L D 0.0000
7 D D -3.1275
8 L D 0.0000
9 K D -3.5016
10 L D 0.0000
11 D D -1.6658
12 L D 0.3045
1 K E -1.8468
2 L E 0.0000
3 D E -2.9146
4 L E 0.0000
5 K E -3.8337
6 L E 0.0000
7 D E -3.5010
8 L E 0.0000
9 K E -3.8543
10 L E 0.0000
11 D E -2.1095
12 L E 0.3552
1 K F -2.0104
2 L F 0.0000
3 D F -3.0783
4 L F 0.0000
5 K F -3.6369
6 L F 0.0000
7 D F -3.2812
8 L F 0.0000
9 K F -3.5656
10 L F 0.0000
11 D F -2.3061
12 L F 0.2015
1 K G -3.4926
2 L G 0.0000
3 D G -4.1178
4 L G 0.0000
5 K G -3.7312
6 L G 0.0000
7 D G -2.9953
8 L G 0.0000
9 K G -3.0858
10 L G 0.0000
11 D G -1.1525
12 L G 1.1874
1 K H -0.8218
2 L H 0.0000
3 D H -2.4248
4 L H 0.0000
5 K H -2.9508
6 L H 0.0000
7 D H -3.3028
8 L H 0.0000
9 K H -4.2496
10 L H 0.0000
11 D H -3.4280
12 L H -0.3087
1 K I -2.7273
2 L I -2.2122
3 D I -3.3481
4 L I -1.5036
5 K I -2.7477
6 L I -1.1279
7 D I -2.3140
8 L I -0.8765
9 K I -2.0362
10 L I -0.3095
11 D I -0.0016
12 L I 1.7829
1 K J 0.7572
2 L J 0.7781
3 D J 0.0000
4 L J 0.1891
5 K J 0.0000
6 L J 0.3944
7 D J 0.0000
8 L J 0.5497
9 K J -1.8954
10 L J -0.4730
11 D J -0.9332
12 L J 0.9614
1 K K -0.3175
2 L K 0.8883
3 D K 0.0000
4 L K 1.4211
5 K K 0.0000
6 L K 1.0452
7 D K 0.0000
8 L K 0.8757
9 K K 0.0000
10 L K 1.1763
11 D K 0.0000
12 L K 2.1892
1 K L 0.0000
2 L L 1.1282
3 D L 0.0000
4 L L 0.7610
5 K L 0.0000
6 L L 0.8343
7 D L 0.0000
8 L L 1.0823
9 K L 0.0000
10 L L 0.8579
11 D L 0.0000
12 L L 1.4948
1 K M 0.7169
2 L M 1.0400
3 D M 0.0000
4 L M 0.7503
5 K M 0.0000
6 L M 0.6786
7 D M 0.0000
8 L M 0.6060
9 K M 0.0000
10 L M 0.7826
11 D M 0.0000
12 L M 2.4648
1 K N 0.0000
2 L N 0.6829
3 D N 0.0000
4 L N 0.2323
5 K N 0.0000
6 L N 0.1094
7 D N 0.0000
8 L N 0.2168
9 K N 0.0000
10 L N 0.7062
11 D N 0.0000
12 L N 2.3346
1 K O 0.0000
2 L O 0.4414
3 D O 0.0000
4 L O -0.0601
5 K O 0.0000
6 L O 0.0939
7 D O 0.0000
8 L O 0.1274
9 K O 0.0000
10 L O 0.7538
11 D O 0.0000
12 L O 2.2085
1 K P 0.0614
2 L P 0.6876
3 D P 0.0000
4 L P 0.1246
5 K P -1.3735
6 L P 0.3274
7 D P -0.9927
8 L P -0.0188
9 K P -1.6646
10 L P 0.5150
11 D P -0.1132
12 L P 1.6333
1 K Q -2.0666
2 L Q 0.0000
3 D Q -2.3829
4 L Q 0.0000
5 K Q -1.6953
6 L Q 0.0000
7 D Q -2.3772
8 L Q 0.0000
9 K Q -2.3755
10 L Q -0.4387
11 D Q -1.4384
12 L Q 1.2057
1 K R -1.2987
2 L R 0.0000
3 D R -2.0875
4 L R 0.0000
5 K R -2.2150
6 L R 0.0000
7 D R -2.0371
8 L R 0.0000
9 K R -2.9205
10 L R 0.0000
11 D R -2.2126
12 L R 0.5512
1 K S -2.6201
2 L S 0.0000
3 D S -3.0174
4 L S 0.0000
5 K S -2.8228
6 L S 0.0000
7 D S -2.2818
8 L S 0.0000
9 K S -2.2393
10 L S 0.0000
11 D S -1.4873
12 L S 1.2684
1 K T -2.3144
2 L T 0.0000
3 D T -2.4848
4 L T 0.0000
5 K T -3.3065
6 L T 0.0000
7 D T -3.7158
8 L T 0.0000
9 K T -3.9700
10 L T 0.0000
11 D T -2.9940
12 L T 0.0519
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Laboratory of Theory of Biopolymers 2018