| Chain sequence(s) |
A: GLPVCGETCFGGTCNTPGCSCSYPICTRN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:06)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.2830 | |
| 2 | L | A | 1.1662 | |
| 3 | P | A | -0.0661 | |
| 4 | V | A | 0.2213 | |
| 5 | C | A | -0.3887 | |
| 6 | G | A | -0.2802 | |
| 7 | E | A | -0.1367 | |
| 8 | T | A | 0.6613 | |
| 9 | C | A | 0.0000 | |
| 10 | F | A | 2.0158 | |
| 11 | G | A | 0.5343 | |
| 12 | G | A | 0.3781 | |
| 13 | T | A | 0.0431 | |
| 14 | C | A | -0.3692 | |
| 15 | N | A | -1.3353 | |
| 16 | T | A | -1.0445 | |
| 17 | P | A | -1.0667 | |
| 18 | G | A | -1.3827 | |
| 19 | C | A | -1.1710 | |
| 20 | S | A | -0.3860 | |
| 21 | C | A | 0.8363 | |
| 22 | S | A | 1.1627 | |
| 23 | Y | A | 1.9551 | |
| 24 | P | A | 1.6067 | |
| 25 | I | A | 1.3856 | |
| 26 | C | A | 0.0000 | |
| 27 | T | A | -0.2354 | |
| 28 | R | A | -1.5633 | |
| 29 | N | A | -1.8922 |