| Chain sequence(s) |
L: CPVFTGYYTGTVSPGD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 466 | C | L | 0.2838 | |
| 467 | P | L | 0.1781 | |
| 468 | V | L | 2.0761 | |
| 469 | F | L | 2.2485 | |
| 470 | T | L | 0.1625 | |
| 471 | G | L | -0.2492 | |
| 472 | Y | L | 1.4272 | |
| 473 | Y | L | 1.3479 | |
| 474 | T | L | 0.0827 | |
| 475 | G | L | -0.2758 | |
| 476 | T | L | 0.0000 | |
| 477 | V | L | 1.7341 | |
| 478 | S | L | 0.0617 | |
| 479 | P | L | -0.3779 | |
| 480 | G | L | -0.8351 | |
| 481 | D | L | -1.7575 |