Project name: RFC9

Status: done

Started: 2025-07-15 15:36:54
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Chain sequence(s) A: NVTATTTPAKGSGKEITSSASGTLAAAPSVTVTTVKKIEKVEVDPNENIELTQDNTVTTTPTATTVSANISAKSKGSKPVKYVNASSSITVTSPA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:58)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:58)
Show buried residues

Minimal score value
-3.2952
Maximal score value
1.1384
Average score
-0.8329
Total score value
-79.1216

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -1.2300
2 V A 0.0000
3 T A -0.3601
4 A A 0.0000
5 T A -0.1051
6 T A 0.0000
7 T A -0.5467
8 P A -0.8865
9 A A 0.0000
10 K A -2.0586
11 G A -1.5825
12 S A -1.7301
13 G A -1.9152
14 K A -3.0084
15 E A -3.0134
16 I A -1.4576
17 T A -0.9027
18 S A -0.5086
19 S A -0.7793
20 A A -0.4072
21 S A -0.3945
22 G A -0.2913
23 T A -0.1863
24 L A -0.1052
25 A A -0.0812
26 A A 0.0209
27 A A -0.0276
28 P A -0.2315
29 S A 0.0662
30 V A 0.5292
31 T A 0.4052
32 V A 1.1384
33 T A 0.8504
34 T A 0.5976
35 V A 0.5858
36 K A -1.8082
37 K A -2.0147
38 I A -1.2229
39 E A -2.5060
40 K A -2.4637
41 V A -1.1930
42 E A -1.5398
43 V A -1.3869
44 D A -1.6639
45 P A -1.3736
46 N A -2.0023
47 E A -2.2084
48 N A -2.6778
49 I A -2.0890
50 E A -2.1485
51 L A -0.7928
52 T A -0.9536
53 Q A -1.6026
54 D A -2.4182
55 N A -1.2989
56 T A -0.4413
57 V A 0.5875
58 T A 0.1947
59 T A 0.1767
60 T A -0.2273
61 P A -0.3356
62 T A -0.1595
63 A A -0.0620
64 T A 0.0000
65 T A 0.0552
66 V A 0.0000
67 S A -0.6351
68 A A 0.0000
69 N A -1.3757
70 I A 0.0000
71 S A -1.2168
72 A A 0.0000
73 K A -2.8854
74 S A 0.0000
75 K A -3.2952
76 G A -2.3916
77 S A -1.8468
78 K A -2.4845
79 P A -2.5039
80 V A 0.0000
81 K A -1.9565
82 Y A -1.3317
83 V A 0.0000
84 N A -1.7850
85 A A 0.0000
86 S A -1.1449
87 S A 0.0000
88 S A -0.2877
89 I A 0.0000
90 T A 0.2691
91 V A 0.0000
92 T A -0.2226
93 S A -0.1809
94 P A -0.3718
95 A A -0.2823
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Laboratory of Theory of Biopolymers 2018