Project name: Mb5-11_LVFFLF

Status: done

Started: 2026-07-06 06:33:53
Settings
Chain sequence(s) A: MQANSGSLEVVEASPTSLQLSWDAFHRYHNGFTHPVRYYRVTYGETGGNSPVQEFTVPGSKSTATFSGLKPGVDYTFTVYAVTWYPRYGYGESGPLSFNYRTELDKPSQ
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:09)
Show buried residues

Minimal score value
-2.7884
Maximal score value
1.4886
Average score
-0.7333
Total score value
-79.9305

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.4515
2 Q A -0.8492
3 A A -0.7964
4 N A -1.5907
5 S A -1.0686
6 G A -1.3042
7 S A -1.1502
8 L A 0.0000
9 E A -1.7755
10 V A -0.3570
11 V A 0.0910
12 E A -1.3619
13 A A -0.9217
14 S A -1.2413
15 P A -1.8968
16 T A -1.2297
17 S A -1.1388
18 L A 0.0000
19 Q A -0.7138
20 L A 0.0000
21 S A -1.1010
22 W A 0.0000
23 D A -2.4859
24 A A -1.4785
25 F A 0.0000
26 H A -1.0531
27 R A 0.0000
28 Y A 1.1028
29 H A 0.2719
30 N A -0.5927
31 G A 0.1239
32 F A 1.4886
33 T A 0.7244
34 H A 0.0498
35 P A -0.4382
36 V A -1.0230
37 R A -1.5689
38 Y A -0.9025
39 Y A 0.0000
40 R A -0.8568
41 V A 0.0000
42 T A 0.0000
43 Y A -0.4021
44 G A -0.7443
45 E A -1.6396
46 T A -1.2766
47 G A -1.2514
48 G A -1.3545
49 N A -1.5404
50 S A -0.9257
51 P A -0.4163
52 V A 0.2758
53 Q A -1.2317
54 E A -1.8212
55 F A -0.7079
56 T A -0.2156
57 V A -0.3768
58 P A -0.9186
59 G A -1.1851
60 S A -1.0873
61 K A -1.5738
62 S A -1.1025
63 T A -0.7195
64 A A 0.0000
65 T A -0.3249
66 F A 0.0000
67 S A -0.7562
68 G A -1.0056
69 L A 0.0000
70 K A -2.4917
71 P A -2.0968
72 G A -1.4507
73 V A -1.3563
74 D A -2.3141
75 Y A 0.0000
76 T A -0.8052
77 F A 0.0000
78 T A -0.4456
79 V A 0.0000
80 Y A -0.3237
81 A A 0.0000
82 V A 0.0000
83 T A 0.0000
84 W A 0.5667
85 Y A 0.0000
86 P A -0.4495
87 R A -1.1039
88 Y A 0.7027
89 G A 0.6806
90 Y A 0.9986
91 G A 0.2456
92 E A -0.7584
93 S A 0.0000
94 G A -0.7119
95 P A -0.4709
96 L A -0.2130
97 S A -0.3468
98 F A -0.5631
99 N A -1.6263
100 Y A -1.5639
101 R A -2.7253
102 T A 0.0000
103 E A -2.5503
104 L A -1.2826
105 D A -2.7236
106 K A -2.7884
107 P A -1.7790
108 S A -1.6310
109 Q A -1.6584
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Laboratory of Theory of Biopolymers 2018