Project name: query_structure

Status: done

Started: 2026-03-17 00:05:20
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Chain sequence(s) A: MASTSGVSDVPRDLEVVAATPTSLLISWDAPAVPVSKYVIYYWPGALISSMQAFKVPGSKSTATISGLKPGVLYSIVVDALTGDGQGSYVWDPITITYRTEGSGS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:47)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:48)
Show buried residues

Minimal score value
-3.6089
Maximal score value
2.6618
Average score
-0.4757
Total score value
-49.9484

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.0308
2 A A 0.4290
3 S A -0.1203
4 T A -0.0786
5 S A -0.0833
6 G A 0.0871
7 V A 1.2910
8 S A -0.1682
9 D A -0.5767
10 V A -0.9941
11 P A 0.0000
12 R A -3.5641
13 D A -3.6089
14 L A 0.0000
15 E A -2.0541
16 V A 0.1984
17 V A 1.5178
18 A A 0.8761
19 A A -0.0649
20 T A -1.0325
21 P A -1.7946
22 T A -1.2440
23 S A -0.7175
24 L A 0.0000
25 L A 0.7124
26 I A 0.0000
27 S A -1.1888
28 W A 0.0000
29 D A -3.4087
30 A A -1.8295
31 P A -0.6931
32 A A -0.0078
33 V A 0.2671
34 P A -0.5731
35 V A -0.7485
36 S A -1.0282
37 K A -1.5487
38 Y A 0.0000
39 V A 0.0000
40 I A 0.0000
41 Y A 0.2648
42 Y A 0.4275
43 W A 0.9405
44 P A 0.2662
45 G A 0.7343
46 A A 1.2990
47 L A 2.4656
48 I A 2.6618
49 S A 1.1774
50 S A 0.6640
51 M A 0.9208
52 Q A -0.4404
53 A A -0.3885
54 F A -0.5238
55 K A -1.6367
56 V A 0.0000
57 P A -1.4502
58 G A -1.3432
59 S A -1.2420
60 K A -2.0972
61 S A -1.4921
62 T A -0.7610
63 A A 0.0000
64 T A 0.2696
65 I A 0.0000
66 S A -0.6530
67 G A -1.0011
68 L A 0.0000
69 K A -2.3017
70 P A -1.9656
71 G A -1.6381
72 V A -0.9246
73 L A -0.5798
74 Y A 0.0000
75 S A 0.0000
76 I A 0.0000
77 V A 0.1883
78 V A 0.0000
79 D A 0.0000
80 A A 0.0000
81 L A -0.1805
82 T A -0.5796
83 G A -1.7093
84 D A -2.7287
85 G A -2.1838
86 Q A -2.1868
87 G A -1.2452
88 S A -0.2308
89 Y A 1.1343
90 V A 0.6710
91 W A 0.7980
92 D A -0.9912
93 P A -0.5084
94 I A -0.4608
95 T A -0.0348
96 I A 0.1593
97 T A -0.1688
98 Y A -0.6830
99 R A -2.0722
100 T A 0.0000
101 E A -2.7133
102 G A -1.9396
103 S A -1.3668
104 G A -1.1168
105 S A -0.7329
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Laboratory of Theory of Biopolymers 2018