| Chain sequence(s) |
B: LSPEQQKEIKEAVQIMADFENMIHPGYKGYEDAYPGVKVKNKWPSWDEFHRADRIMVQYMQLQA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:43)
[INFO] Main: Simulation completed successfully. (00:01:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | 0.6116 | |
| 2 | S | B | -0.8996 | |
| 3 | P | B | -2.1580 | |
| 4 | E | B | -3.5344 | |
| 5 | Q | B | -2.9311 | |
| 6 | Q | B | -3.6338 | |
| 7 | K | B | -4.6221 | |
| 8 | E | B | -4.5200 | |
| 9 | I | B | 0.0000 | |
| 10 | K | B | -3.4990 | |
| 11 | E | B | -3.3444 | |
| 12 | A | B | 0.0000 | |
| 13 | V | B | 0.0000 | |
| 14 | Q | B | -1.7137 | |
| 15 | I | B | -1.2887 | |
| 16 | M | B | -0.6339 | |
| 17 | A | B | 0.0000 | |
| 18 | D | B | 0.0000 | |
| 19 | F | B | 0.1851 | |
| 20 | E | B | -0.2346 | |
| 21 | N | B | -0.5583 | |
| 22 | M | B | 0.7248 | |
| 23 | I | B | 1.5126 | |
| 24 | H | B | -0.3185 | |
| 25 | P | B | -0.6018 | |
| 26 | G | B | -0.7827 | |
| 27 | Y | B | -0.6729 | |
| 28 | K | B | -2.3411 | |
| 29 | G | B | -1.4141 | |
| 30 | Y | B | -1.3739 | |
| 31 | E | B | -2.1453 | |
| 32 | D | B | -2.5360 | |
| 33 | A | B | -1.1096 | |
| 34 | Y | B | -1.1811 | |
| 35 | P | B | -1.3348 | |
| 36 | G | B | -1.2931 | |
| 37 | V | B | -1.8137 | |
| 38 | K | B | -2.6912 | |
| 39 | V | B | -2.2004 | |
| 40 | K | B | -2.6653 | |
| 41 | N | B | -2.5675 | |
| 42 | K | B | -2.0052 | |
| 43 | W | B | 0.0673 | |
| 44 | P | B | 0.0000 | |
| 45 | S | B | -0.4082 | |
| 46 | W | B | -0.3588 | |
| 47 | D | B | -2.4989 | |
| 48 | E | B | -2.2286 | |
| 49 | F | B | -1.5892 | |
| 50 | H | B | -2.8280 | |
| 51 | R | B | -3.6479 | |
| 52 | A | B | 0.0000 | |
| 53 | D | B | -2.0733 | |
| 54 | R | B | -2.2353 | |
| 55 | I | B | -1.6752 | |
| 56 | M | B | 0.0000 | |
| 57 | V | B | 0.7808 | |
| 58 | Q | B | -0.3597 | |
| 59 | Y | B | 0.1735 | |
| 60 | M | B | 0.6453 | |
| 61 | Q | B | -0.1945 | |
| 62 | L | B | 0.8300 | |
| 63 | Q | B | -0.3594 | |
| 64 | A | B | -0.2958 |