Project name: query_structure

Status: done

Started: 2026-03-16 22:55:37
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Chain sequence(s) A: ATGVRAVPGNENSLEIEELARFAVDEHNKKENALLEFVRVVKAKEQIDLTGQWLFTMYYLTLEAKDGGKKKLYEAKVWVKPLWQYDAQYNFKELQEFKPVGDA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:49)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:50)
Show buried residues

Minimal score value
-4.0522
Maximal score value
1.5457
Average score
-1.0102
Total score value
-104.0519

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.3645
2 T A 0.2571
3 G A -0.0239
4 V A 0.2467
5 R A -1.4085
6 A A -1.1637
7 V A -1.1813
8 P A -1.3397
9 G A -1.4389
10 N A -2.0597
11 E A -2.4974
12 N A -2.5533
13 S A -1.5961
14 L A -0.8244
15 E A -2.6044
16 I A 0.0000
17 E A -3.2105
18 E A -3.0241
19 L A 0.0000
20 A A 0.0000
21 R A -2.3048
22 F A -1.2588
23 A A 0.0000
24 V A 0.0000
25 D A -1.7621
26 E A -2.3062
27 H A -2.5164
28 N A -2.5256
29 K A -3.6404
30 K A -4.0522
31 E A -3.7408
32 N A -3.0337
33 A A -1.6820
34 L A -0.0201
35 L A 0.0000
36 E A -1.9865
37 F A -1.3751
38 V A -1.2793
39 R A -2.3154
40 V A -1.8503
41 V A -0.7486
42 K A -2.1450
43 A A -1.9535
44 K A -1.5299
45 E A -0.7253
46 Q A 0.0137
47 I A 0.4198
48 D A 0.8984
49 L A 1.4469
50 T A 0.4767
51 G A -0.3143
52 Q A -0.6245
53 W A 0.5636
54 L A 1.1436
55 F A 0.8235
56 T A 0.0000
57 M A -0.0933
58 Y A 0.0000
59 Y A -0.7467
60 L A 0.0000
61 T A -0.9849
62 L A 0.0000
63 E A -1.6581
64 A A 0.0000
65 K A -3.0445
66 D A -2.6767
67 G A -2.0049
68 G A -2.6783
69 K A -3.6913
70 K A -3.4825
71 K A -2.2344
72 L A -0.9835
73 Y A 0.0000
74 E A -1.0183
75 A A 0.0000
76 K A -1.2862
77 V A 0.0000
78 W A -0.5995
79 V A -0.3373
80 K A 0.1549
81 P A 0.7860
82 L A 1.5457
83 W A 1.3346
84 Q A 0.1064
85 Y A 0.3843
86 D A -1.1211
87 A A -0.6533
88 Q A -0.8737
89 Y A 0.0893
90 N A -0.7013
91 F A -0.2257
92 K A -1.0814
93 E A -1.5396
94 L A 0.0000
95 Q A -1.4913
96 E A -1.6641
97 F A -1.2303
98 K A -1.4396
99 P A -0.8850
100 V A -0.2733
101 G A -1.1738
102 D A -1.7858
103 A A -0.8312
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Laboratory of Theory of Biopolymers 2018