| Chain sequence(s) |
A: ATGVRAVPGNENSLEIEELARFAVDEHNKKENALLEFVRVVKAKEQIDLTGQWLFTMYYLTLEAKDGGKKKLYEAKVWVKPLWQYDAQYNFKELQEFKPVGDA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:49)
[INFO] Main: Simulation completed successfully. (00:04:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.3645 | |
| 2 | T | A | 0.2571 | |
| 3 | G | A | -0.0239 | |
| 4 | V | A | 0.2467 | |
| 5 | R | A | -1.4085 | |
| 6 | A | A | -1.1637 | |
| 7 | V | A | -1.1813 | |
| 8 | P | A | -1.3397 | |
| 9 | G | A | -1.4389 | |
| 10 | N | A | -2.0597 | |
| 11 | E | A | -2.4974 | |
| 12 | N | A | -2.5533 | |
| 13 | S | A | -1.5961 | |
| 14 | L | A | -0.8244 | |
| 15 | E | A | -2.6044 | |
| 16 | I | A | 0.0000 | |
| 17 | E | A | -3.2105 | |
| 18 | E | A | -3.0241 | |
| 19 | L | A | 0.0000 | |
| 20 | A | A | 0.0000 | |
| 21 | R | A | -2.3048 | |
| 22 | F | A | -1.2588 | |
| 23 | A | A | 0.0000 | |
| 24 | V | A | 0.0000 | |
| 25 | D | A | -1.7621 | |
| 26 | E | A | -2.3062 | |
| 27 | H | A | -2.5164 | |
| 28 | N | A | -2.5256 | |
| 29 | K | A | -3.6404 | |
| 30 | K | A | -4.0522 | |
| 31 | E | A | -3.7408 | |
| 32 | N | A | -3.0337 | |
| 33 | A | A | -1.6820 | |
| 34 | L | A | -0.0201 | |
| 35 | L | A | 0.0000 | |
| 36 | E | A | -1.9865 | |
| 37 | F | A | -1.3751 | |
| 38 | V | A | -1.2793 | |
| 39 | R | A | -2.3154 | |
| 40 | V | A | -1.8503 | |
| 41 | V | A | -0.7486 | |
| 42 | K | A | -2.1450 | |
| 43 | A | A | -1.9535 | |
| 44 | K | A | -1.5299 | |
| 45 | E | A | -0.7253 | |
| 46 | Q | A | 0.0137 | |
| 47 | I | A | 0.4198 | |
| 48 | D | A | 0.8984 | |
| 49 | L | A | 1.4469 | |
| 50 | T | A | 0.4767 | |
| 51 | G | A | -0.3143 | |
| 52 | Q | A | -0.6245 | |
| 53 | W | A | 0.5636 | |
| 54 | L | A | 1.1436 | |
| 55 | F | A | 0.8235 | |
| 56 | T | A | 0.0000 | |
| 57 | M | A | -0.0933 | |
| 58 | Y | A | 0.0000 | |
| 59 | Y | A | -0.7467 | |
| 60 | L | A | 0.0000 | |
| 61 | T | A | -0.9849 | |
| 62 | L | A | 0.0000 | |
| 63 | E | A | -1.6581 | |
| 64 | A | A | 0.0000 | |
| 65 | K | A | -3.0445 | |
| 66 | D | A | -2.6767 | |
| 67 | G | A | -2.0049 | |
| 68 | G | A | -2.6783 | |
| 69 | K | A | -3.6913 | |
| 70 | K | A | -3.4825 | |
| 71 | K | A | -2.2344 | |
| 72 | L | A | -0.9835 | |
| 73 | Y | A | 0.0000 | |
| 74 | E | A | -1.0183 | |
| 75 | A | A | 0.0000 | |
| 76 | K | A | -1.2862 | |
| 77 | V | A | 0.0000 | |
| 78 | W | A | -0.5995 | |
| 79 | V | A | -0.3373 | |
| 80 | K | A | 0.1549 | |
| 81 | P | A | 0.7860 | |
| 82 | L | A | 1.5457 | |
| 83 | W | A | 1.3346 | |
| 84 | Q | A | 0.1064 | |
| 85 | Y | A | 0.3843 | |
| 86 | D | A | -1.1211 | |
| 87 | A | A | -0.6533 | |
| 88 | Q | A | -0.8737 | |
| 89 | Y | A | 0.0893 | |
| 90 | N | A | -0.7013 | |
| 91 | F | A | -0.2257 | |
| 92 | K | A | -1.0814 | |
| 93 | E | A | -1.5396 | |
| 94 | L | A | 0.0000 | |
| 95 | Q | A | -1.4913 | |
| 96 | E | A | -1.6641 | |
| 97 | F | A | -1.2303 | |
| 98 | K | A | -1.4396 | |
| 99 | P | A | -0.8850 | |
| 100 | V | A | -0.2733 | |
| 101 | G | A | -1.1738 | |
| 102 | D | A | -1.7858 | |
| 103 | A | A | -0.8312 |