Project name: FYGHKYF4

Status: done

Started: 2026-04-14 09:47:43
Settings
Chain sequence(s) A: FYGHKYF
C: FYGHKYF
B: FYGHKYF
D: FYGHKYF
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:49)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:51)
Show buried residues

Minimal score value
-1.0825
Maximal score value
3.064
Average score
1.3812
Total score value
38.6741

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 2.0580
2 Y A 2.5417
3 G A 2.0787
4 H A 0.2023
5 K A 0.0177
6 Y A 1.3650
7 F A 1.9194
1 F B 2.7011
2 Y B 1.5163
3 G B -0.2650
4 H B -0.7625
5 K B -1.0139
6 Y B 1.2278
7 F B 2.0775
1 F C 2.1871
2 Y C 3.0640
3 G C 1.6426
4 H C 0.9999
5 K C 2.4523
6 Y C 2.7193
7 F C 2.9684
1 F D 2.5228
2 Y D 2.4325
3 G D 0.1555
4 H D -1.0825
5 K D -1.0768
6 Y D 1.4060
7 F D 2.6189
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Laboratory of Theory of Biopolymers 2018