| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPEKDIVVNGKVLVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTEYLHDGEDVRVNFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRAGPMGHPLPDDPPPSPLYVPPPPSSPYAVLPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEENVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9432 | |
| 2 | L | A | 1.9634 | |
| 3 | P | A | 0.8286 | |
| 4 | P | A | 0.3756 | |
| 5 | T | A | 0.1220 | |
| 6 | T | A | 0.1291 | |
| 7 | P | A | 0.1793 | |
| 8 | V | A | 1.2129 | |
| 9 | A | A | 0.0869 | |
| 10 | K | A | -1.0276 | |
| 11 | V | A | -0.1716 | |
| 12 | Q | A | -1.4020 | |
| 13 | S | A | -1.5522 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4117 | |
| 16 | E | A | -2.4357 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4614 | |
| 20 | P | A | 0.1279 | |
| 21 | T | A | 0.1804 | |
| 22 | S | A | -0.0952 | |
| 23 | L | A | 0.0904 | |
| 24 | F | A | -0.0279 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2906 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9044 | |
| 31 | R | A | -2.6960 | |
| 32 | L | A | -0.8130 | |
| 33 | L | A | 1.1507 | |
| 34 | T | A | 1.3672 | |
| 35 | V | A | 1.8314 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.4230 | |
| 38 | P | A | 0.0000 | |
| 39 | E | A | -1.3145 | |
| 40 | K | A | -2.0099 | |
| 41 | D | A | -0.8511 | |
| 42 | I | A | 1.1911 | |
| 43 | V | A | 2.2348 | |
| 44 | V | A | 1.6697 | |
| 45 | N | A | -0.5300 | |
| 46 | G | A | -0.3604 | |
| 47 | K | A | -0.1238 | |
| 48 | V | A | 2.0378 | |
| 49 | L | A | 2.5337 | |
| 50 | V | A | 1.4452 | |
| 51 | P | A | 0.2641 | |
| 52 | K | A | -0.8539 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1414 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4049 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2743 | |
| 70 | K | A | -1.7919 | |
| 71 | F | A | -0.6396 | |
| 72 | A | A | -0.5771 | |
| 73 | L | A | -0.8647 | |
| 74 | P | A | -1.2043 | |
| 75 | Q | A | -2.5076 | |
| 76 | K | A | -3.1105 | |
| 77 | D | A | -2.9933 | |
| 78 | F | A | -1.6711 | |
| 79 | Y | A | -1.8978 | |
| 80 | D | A | -2.7013 | |
| 81 | P | A | -2.3154 | |
| 82 | E | A | -3.0555 | |
| 83 | K | A | -3.4040 | |
| 84 | E | A | -2.4688 | |
| 85 | R | A | -1.2993 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6541 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9737 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3760 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7044 | |
| 99 | G | A | -0.5381 | |
| 100 | P | A | -0.4178 | |
| 101 | L | A | 0.0169 | |
| 102 | G | A | -0.2892 | |
| 103 | K | A | -0.8069 | |
| 104 | G | A | -0.5873 | |
| 105 | S | A | -0.6118 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.2399 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1571 | |
| 110 | L | A | -0.1210 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1149 | |
| 113 | K | A | -0.4579 | |
| 114 | L | A | -1.0384 | |
| 115 | G | A | -1.0683 | |
| 116 | D | A | -1.4289 | |
| 117 | T | A | -0.9811 | |
| 118 | E | A | -1.8011 | |
| 119 | N | A | -2.2013 | |
| 120 | P | A | -1.8245 | |
| 121 | T | A | -1.4739 | |
| 122 | E | A | -2.0075 | |
| 123 | Y | A | -0.3960 | |
| 124 | L | A | -0.6817 | |
| 125 | H | A | -1.4560 | |
| 126 | D | A | -2.7773 | |
| 127 | G | A | -2.8719 | |
| 128 | E | A | -3.2664 | |
| 129 | D | A | -2.9525 | |
| 130 | V | A | -1.6692 | |
| 131 | R | A | -1.2330 | |
| 132 | V | A | -0.2204 | |
| 133 | N | A | -0.8712 | |
| 134 | F | A | -0.3667 | |
| 135 | S | A | -0.4076 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5889 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5593 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1897 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1753 | |
| 157 | D | A | 0.3435 | |
| 158 | L | A | 0.8087 | |
| 159 | A | A | 0.1933 | |
| 160 | E | A | -1.4446 | |
| 161 | P | A | -0.1995 | |
| 162 | C | A | 0.1851 | |
| 163 | P | A | -0.1676 | |
| 164 | G | A | -0.0734 | |
| 165 | L | A | 0.5950 | |
| 166 | P | A | -0.1110 | |
| 167 | P | A | -0.3389 | |
| 168 | G | A | -0.4242 | |
| 169 | A | A | -0.0285 | |
| 170 | C | A | 0.6586 | |
| 171 | P | A | 0.5369 | |
| 172 | P | A | 0.8791 | |
| 173 | I | A | 2.0654 | |
| 174 | Q | A | 0.8859 | |
| 175 | L | A | 1.5159 | |
| 176 | V | A | 0.8676 | |
| 177 | N | A | -0.2891 | |
| 178 | S | A | 0.0327 | |
| 179 | V | A | 0.4331 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3778 | |
| 182 | D | A | 0.0755 | |
| 183 | G | A | -0.1589 | |
| 184 | D | A | -0.5327 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1223 | |
| 190 | F | A | 0.0681 | |
| 191 | G | A | -0.0977 | |
| 192 | N | A | -0.2523 | |
| 193 | M | A | -0.1086 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4106 | |
| 197 | E | A | -2.6457 | |
| 198 | L | A | -1.2407 | |
| 199 | Q | A | -2.5785 | |
| 200 | Q | A | -3.3293 | |
| 201 | D | A | -3.4851 | |
| 202 | R | A | -3.3344 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | -0.0722 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4542 | |
| 211 | S | A | -1.8957 | |
| 212 | T | A | -1.4340 | |
| 213 | R | A | -2.0774 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1546 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3462 | |
| 220 | L | A | 0.6155 | |
| 221 | K | A | -1.0859 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8077 | |
| 224 | N | A | -1.4829 | |
| 225 | E | A | -1.2232 | |
| 226 | A | A | -0.5998 | |
| 227 | Y | A | -0.3638 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6483 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0740 | |
| 234 | F | A | 0.2499 | |
| 235 | G | A | -0.7975 | |
| 236 | R | A | -2.5656 | |
| 237 | R | A | -2.7756 | |
| 238 | E | A | -2.1059 | |
| 239 | Q | A | -0.0900 | |
| 240 | V | A | 1.4346 | |
| 241 | Y | A | 1.0872 | |
| 242 | A | A | 0.1573 | |
| 243 | R | A | -1.0776 | |
| 244 | H | A | -1.0131 | |
| 245 | F | A | 0.0375 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.7228 | |
| 249 | A | A | -1.4195 | |
| 250 | G | A | -1.2302 | |
| 251 | P | A | -0.9168 | |
| 252 | M | A | -0.7190 | |
| 253 | G | A | -1.0320 | |
| 254 | H | A | -1.2372 | |
| 255 | P | A | -0.8099 | |
| 256 | L | A | -0.1603 | |
| 257 | P | A | -1.1062 | |
| 258 | D | A | -2.1776 | |
| 259 | D | A | -1.6886 | |
| 260 | P | A | -1.1998 | |
| 261 | P | A | -0.4691 | |
| 262 | P | A | -0.1015 | |
| 263 | S | A | -0.0268 | |
| 264 | P | A | 0.5401 | |
| 265 | L | A | 1.5958 | |
| 266 | Y | A | 1.4842 | |
| 267 | V | A | 1.8332 | |
| 268 | P | A | 0.8038 | |
| 269 | P | A | 0.6920 | |
| 270 | P | A | -0.1614 | |
| 271 | P | A | -0.1568 | |
| 272 | S | A | -0.1575 | |
| 273 | S | A | 0.1873 | |
| 274 | P | A | 0.5323 | |
| 275 | Y | A | 1.5243 | |
| 276 | A | A | 1.2400 | |
| 277 | V | A | 2.0035 | |
| 278 | L | A | 1.5710 | |
| 279 | P | A | 0.2698 | |
| 280 | P | A | 0.0000 | |
| 281 | Y | A | 0.0273 | |
| 282 | D | A | -0.7392 | |
| 283 | Y | A | 0.8732 | |
| 284 | F | A | 0.7110 | |
| 285 | G | A | 0.2263 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.7860 | |
| 291 | L | A | 1.6142 | |
| 292 | V | A | 0.5796 | |
| 293 | S | A | -0.1567 | |
| 294 | S | A | -0.9597 | |
| 295 | D | A | -1.8414 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0897 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6527 | |
| 301 | R | A | -1.8601 | |
| 302 | P | A | -0.9796 | |
| 303 | F | A | -0.2004 | |
| 304 | W | A | -0.5675 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0842 | |
| 307 | R | A | -2.8306 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2548 | |
| 310 | G | A | -1.2209 | |
| 311 | N | A | -1.2651 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8306 | |
| 319 | N | A | -0.9407 | |
| 320 | E | A | -1.0359 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3762 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1453 | |
| 333 | N | A | 0.5447 | |
| 334 | F | A | 1.8116 | |
| 335 | T | A | 0.9159 | |
| 336 | I | A | 0.4850 | |
| 337 | S | A | -0.9308 | |
| 338 | Q | A | -1.7301 | |
| 339 | Q | A | -1.3565 | |
| 340 | L | A | 0.6590 | |
| 341 | C | A | 0.2804 | |
| 342 | T | A | -0.5129 | |
| 343 | P | A | -0.9672 | |
| 344 | E | A | -2.3503 | |
| 345 | E | A | -2.6364 | |
| 346 | N | A | -1.5657 | |
| 347 | V | A | 0.4471 | |
| 348 | Y | A | 0.8986 | |
| 349 | D | A | -0.1949 | |
| 350 | P | A | -0.3572 | |
| 351 | S | A | -0.2973 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7879 | |
| 354 | K | A | -1.7590 | |
| 355 | N | A | -1.7361 | |
| 356 | Y | A | -0.0558 | |
| 357 | L | A | 0.6201 | |
| 358 | R | A | 0.9335 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3959 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.1001 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0823 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6966 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3034 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3196 | |
| 376 | L | A | -1.7196 | |
| 377 | D | A | -2.0132 | |
| 378 | P | A | -1.0481 | |
| 379 | G | A | -1.0205 | |
| 380 | V | A | -0.9379 | |
| 381 | L | A | -0.5348 | |
| 382 | A | A | -0.6571 | |
| 383 | H | A | -0.8063 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4064 | |
| 386 | T | A | -0.5507 | |
| 387 | M | A | -0.2994 | |
| 388 | N | A | -0.8610 | |
| 389 | P | A | -1.2415 | |
| 390 | T | A | -1.4599 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4772 | |
| 393 | E | A | -2.8195 | |
| 394 | N | A | -2.4498 | |
| 395 | W | A | -1.4547 | |
| 396 | N | A | -1.2638 | |
| 397 | L | A | -0.2747 | |
| 398 | G | A | 0.4706 | |
| 399 | F | A | 2.3873 | |
| 400 | V | A | 1.7826 | |
| 401 | P | A | 0.0225 | |
| 402 | P | A | -1.8667 | |
| 403 | K | A | -3.3235 | |
| 404 | E | A | -3.7840 | |
| 405 | R | A | -3.9284 | |
| 406 | E | A | -3.7936 | |
| 407 | D | A | -2.8674 | |
| 408 | P | A | -1.7662 | |
| 409 | Y | A | -0.9869 | |
| 410 | K | A | -2.1211 | |
| 411 | G | A | -0.6399 | |
| 412 | L | A | 0.6685 | |
| 413 | I | A | 1.5843 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3875 | |
| 416 | E | A | -1.6791 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9415 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0454 | |
| 421 | E | A | -2.7715 | |
| 422 | R | A | -2.6196 | |
| 423 | F | A | -1.2761 | |
| 424 | S | A | -1.4744 | |
| 425 | Q | A | -1.8672 | |
| 426 | D | A | -2.9084 | |
| 427 | L | A | -2.0038 | |
| 428 | D | A | -2.7857 | |
| 429 | Q | A | -2.6255 | |
| 430 | F | A | -1.4441 | |
| 431 | A | A | -0.9300 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6863 | |
| 435 | K | A | -0.7590 | |
| 436 | F | A | 0.1086 | |
| 437 | L | A | 0.9944 | |
| 438 | Y | A | 0.7962 | |
| 439 | Q | A | -0.2907 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine