Project name: query_structure

Status: done

Started: 2026-03-16 23:47:51
Settings
Chain sequence(s) A: HEPCGESCVFIPCITTVVGCSCKNKVCYD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:19)
Show buried residues

Minimal score value
-2.8531
Maximal score value
2.8959
Average score
0.0459
Total score value
1.3303

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 H A -2.3713
2 E A -2.8531
3 P A -1.8037
4 C A -0.7506
5 G A -0.9724
6 E A 0.0688
7 S A 0.3035
8 C A 1.0600
9 V A 1.5396
10 F A 2.8554
11 I A 2.8250
12 P A 1.6174
13 C A 0.0000
14 I A 2.7226
15 T A 1.7758
16 T A 1.6722
17 V A 2.8959
18 V A 2.3979
19 G A 0.5980
20 C A -0.2005
21 S A -0.3594
22 C A -0.5709
23 K A -1.9772
24 N A -2.2163
25 K A -1.5596
26 V A -0.9113
27 C A 0.0000
28 Y A -2.0170
29 D A -2.4385
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Laboratory of Theory of Biopolymers 2018