Project name: GGGHKGF12

Status: done

Started: 2026-02-23 06:07:34
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Chain sequence(s) A: GGGHKGF
C: GGGHKGF
B: GGGHKGF
E: GGGHKGF
D: GGGHKGF
G: GGGHKGF
F: GGGHKGF
I: GGGHKGF
H: GGGHKGF
K: GGGHKGF
J: GGGHKGF
L: GGGHKGF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:14)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:17)
Show buried residues

Minimal score value
-3.4687
Maximal score value
2.3815
Average score
-1.4144
Total score value
-118.8067

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.7065
2 G A -2.1929
3 G A -2.9682
4 H A -3.0569
5 K A -2.1518
6 G A -0.3419
7 F A 1.7556
1 G B -1.4023
2 G B -1.7483
3 G B -2.7345
4 H B -3.4687
5 K B -3.3891
6 G B -1.4804
7 F B 0.5764
1 G C -1.5540
2 G C -1.5382
3 G C -2.1887
4 H C -2.8991
5 K C -2.4101
6 G C -0.8616
7 F C 1.0991
1 G D -1.5625
2 G D -1.9445
3 G D -2.3781
4 H D -2.5160
5 K D -2.0704
6 G D -0.8263
7 F D 1.2503
1 G E -1.6521
2 G E -2.1958
3 G E -2.5742
4 H E -2.8804
5 K E -2.7885
6 G E -1.4230
7 F E 1.1256
1 G F -1.5803
2 G F -2.3293
3 G F -2.5966
4 H F -2.7090
5 K F -2.4144
6 G F -0.3057
7 F F 1.8552
1 G G -1.5208
2 G G -1.7160
3 G G -2.2923
4 H G -2.1994
5 K G -1.1539
6 G G 0.1838
7 F G 2.3815
1 G H -1.3600
2 G H -1.6736
3 G H -2.1752
4 H H -2.5229
5 K H -1.7370
6 G H -0.0755
7 F H 2.1066
1 G I -1.9869
2 G I -1.7861
3 G I -2.0722
4 H I -2.1947
5 K I -2.0025
6 G I -0.4747
7 F I 1.6372
1 G J 0.0000
2 G J -1.9664
3 G J -2.5073
4 H J -2.5085
5 K J -2.3935
6 G J -0.8905
7 F J 1.4099
1 G K -1.4894
2 G K -1.9305
3 G K -2.6800
4 H K -3.0207
5 K K -2.0671
6 G K -0.5130
7 F K 1.8871
1 G L -1.5988
2 G L -2.4063
3 G L -2.4257
4 H L -2.5412
5 K L -2.1628
6 G L -0.6725
7 F L 1.4832
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Laboratory of Theory of Biopolymers 2018