| Chain sequence(s) |
A: AQNPHERGPDPSNSYIEQARGSYSVSQRSISRLGSDGFRDGTMYYPTSTADGRFGVVAISPGYTASESTIAWLGPRLASFGFVVVTINTDSRYDQPRQRATQLHAALDHAIGDSVVGPRIDTSRQAVMGHSMGGGGALQAAEERDEIRAAVPLTPWNLKKGWSGVDAATLVIGAENDAIAPVRSHSIPFYESLTNAERRAYLELRREGHFAPNSSNTLIAKYSVSWLKRYVDNDLRYDQFIDPGPRTGITTGVSDYRLG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:06)
[INFO] Main: Simulation completed successfully. (00:04:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.6277 | |
| 2 | Q | A | -1.5605 | |
| 3 | N | A | -1.3786 | |
| 4 | P | A | -1.6710 | |
| 5 | H | A | -1.9703 | |
| 6 | E | A | -2.1145 | |
| 7 | R | A | 0.0000 | |
| 8 | G | A | -1.1418 | |
| 9 | P | A | -1.3547 | |
| 10 | D | A | -2.1110 | |
| 11 | P | A | 0.0000 | |
| 12 | S | A | -1.5212 | |
| 13 | N | A | -1.9243 | |
| 14 | S | A | -1.3726 | |
| 15 | Y | A | -1.5389 | |
| 16 | I | A | 0.0000 | |
| 17 | E | A | -2.1083 | |
| 18 | Q | A | -2.0133 | |
| 19 | A | A | -1.3577 | |
| 20 | R | A | -1.9494 | |
| 21 | G | A | -1.2164 | |
| 22 | S | A | -0.6695 | |
| 23 | Y | A | -0.3226 | |
| 24 | S | A | -0.2789 | |
| 25 | V | A | -0.2176 | |
| 26 | S | A | -0.6638 | |
| 27 | Q | A | -1.5588 | |
| 28 | R | A | -1.3389 | |
| 29 | S | A | -1.1768 | |
| 30 | I | A | 0.0000 | |
| 31 | S | A | -1.2865 | |
| 32 | R | A | -2.3778 | |
| 33 | L | A | -0.1099 | |
| 34 | G | A | -0.9946 | |
| 35 | S | A | -1.7955 | |
| 36 | D | A | -2.7890 | |
| 37 | G | A | -2.3820 | |
| 38 | F | A | 0.0000 | |
| 39 | R | A | -3.1248 | |
| 40 | D | A | -2.0926 | |
| 41 | G | A | 0.0000 | |
| 42 | T | A | -0.7180 | |
| 43 | M | A | 0.0000 | |
| 44 | Y | A | 0.0000 | |
| 45 | Y | A | 0.0000 | |
| 46 | P | A | 0.0000 | |
| 47 | T | A | -0.2000 | |
| 48 | S | A | -0.6183 | |
| 49 | T | A | -1.0517 | |
| 50 | A | A | -0.9852 | |
| 51 | D | A | -2.1429 | |
| 52 | G | A | -2.1217 | |
| 53 | R | A | -2.5849 | |
| 54 | F | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | V | A | 0.0000 | |
| 57 | V | A | 0.0000 | |
| 58 | A | A | 0.0000 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | 0.0000 | |
| 61 | P | A | 0.0000 | |
| 62 | G | A | 0.0000 | |
| 63 | Y | A | 0.5184 | |
| 64 | T | A | -0.0609 | |
| 65 | A | A | -0.2785 | |
| 66 | S | A | -0.6511 | |
| 67 | E | A | -0.5024 | |
| 68 | S | A | -0.4282 | |
| 69 | T | A | -0.1015 | |
| 70 | I | A | 0.0000 | |
| 71 | A | A | -0.1744 | |
| 72 | W | A | -0.0732 | |
| 73 | L | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | P | A | -0.3995 | |
| 76 | R | A | 0.0000 | |
| 77 | L | A | 0.0000 | |
| 78 | A | A | 0.0000 | |
| 79 | S | A | 0.0000 | |
| 80 | F | A | 0.0000 | |
| 81 | G | A | 0.0000 | |
| 82 | F | A | 0.0000 | |
| 83 | V | A | 0.0000 | |
| 84 | V | A | 0.0000 | |
| 85 | V | A | 0.0000 | |
| 86 | T | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | N | A | -1.7535 | |
| 89 | T | A | 0.0000 | |
| 90 | D | A | -3.1980 | |
| 91 | S | A | -1.7023 | |
| 92 | R | A | -1.6901 | |
| 93 | Y | A | 0.1524 | |
| 94 | D | A | 0.0000 | |
| 95 | Q | A | -0.9640 | |
| 96 | P | A | 0.0000 | |
| 97 | R | A | -2.4294 | |
| 98 | Q | A | -2.0938 | |
| 99 | R | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | T | A | -1.1505 | |
| 102 | Q | A | 0.0000 | |
| 103 | L | A | 0.0000 | |
| 104 | H | A | -0.8652 | |
| 105 | A | A | -1.1079 | |
| 106 | A | A | 0.0000 | |
| 107 | L | A | 0.0000 | |
| 108 | D | A | -1.6809 | |
| 109 | H | A | -1.4003 | |
| 110 | A | A | 0.0000 | |
| 111 | I | A | -0.4209 | |
| 112 | G | A | -0.7431 | |
| 113 | D | A | -0.4193 | |
| 114 | S | A | 0.0139 | |
| 115 | V | A | 0.6567 | |
| 116 | V | A | 0.0000 | |
| 117 | G | A | -0.5049 | |
| 118 | P | A | -0.6403 | |
| 119 | R | A | -1.1664 | |
| 120 | I | A | 0.0000 | |
| 121 | D | A | -1.0110 | |
| 122 | T | A | -0.7458 | |
| 123 | S | A | -0.9288 | |
| 124 | R | A | 0.0000 | |
| 125 | Q | A | 0.0000 | |
| 126 | A | A | 0.0000 | |
| 127 | V | A | 0.0000 | |
| 128 | M | A | 0.0000 | |
| 129 | G | A | 0.0000 | |
| 130 | H | A | 0.0000 | |
| 131 | S | A | 0.0000 | |
| 132 | M | A | 0.2351 | |
| 133 | G | A | 0.0000 | |
| 134 | G | A | 0.0000 | |
| 135 | G | A | 0.0000 | |
| 136 | G | A | 0.0000 | |
| 137 | A | A | 0.0000 | |
| 138 | L | A | 0.0000 | |
| 139 | Q | A | 0.0000 | |
| 140 | A | A | 0.0000 | |
| 141 | A | A | 0.0000 | |
| 142 | E | A | -2.4719 | |
| 143 | E | A | -3.0478 | |
| 144 | R | A | -2.8116 | |
| 145 | D | A | -3.3635 | |
| 146 | E | A | -2.3515 | |
| 147 | I | A | 0.0000 | |
| 148 | R | A | -2.4409 | |
| 149 | A | A | 0.0000 | |
| 150 | A | A | 0.0000 | |
| 151 | V | A | 0.0000 | |
| 152 | P | A | 0.0000 | |
| 153 | L | A | 0.0000 | |
| 154 | T | A | 0.0000 | |
| 155 | P | A | 0.0000 | |
| 156 | W | A | 0.5730 | |
| 157 | N | A | 0.0000 | |
| 158 | L | A | 0.7939 | |
| 159 | K | A | -0.7462 | |
| 160 | K | A | -1.2140 | |
| 161 | G | A | -1.1258 | |
| 162 | W | A | 0.0000 | |
| 163 | S | A | -1.5454 | |
| 164 | G | A | -1.7742 | |
| 165 | V | A | 0.0000 | |
| 166 | D | A | -3.7750 | |
| 167 | A | A | 0.0000 | |
| 168 | A | A | 0.0000 | |
| 169 | T | A | 0.0000 | |
| 170 | L | A | 0.0000 | |
| 171 | V | A | 0.0000 | |
| 172 | I | A | 0.0000 | |
| 173 | G | A | 0.0000 | |
| 174 | A | A | 0.0000 | |
| 175 | E | A | -2.1036 | |
| 176 | N | A | -1.7855 | |
| 177 | D | A | 0.0000 | |
| 178 | A | A | 0.4045 | |
| 179 | I | A | 1.6173 | |
| 180 | A | A | 0.0000 | |
| 181 | P | A | -0.4912 | |
| 182 | V | A | 0.0000 | |
| 183 | R | A | -1.9302 | |
| 184 | S | A | -0.9061 | |
| 185 | H | A | 0.0000 | |
| 186 | S | A | 0.0000 | |
| 187 | I | A | -1.0554 | |
| 188 | P | A | -1.4195 | |
| 189 | F | A | 0.0000 | |
| 190 | Y | A | 0.0000 | |
| 191 | E | A | -2.1102 | |
| 192 | S | A | -1.4649 | |
| 193 | L | A | 0.0000 | |
| 194 | T | A | -1.8908 | |
| 195 | N | A | -2.5866 | |
| 196 | A | A | -2.9106 | |
| 197 | E | A | -3.1618 | |
| 198 | R | A | -2.0119 | |
| 199 | R | A | -1.6861 | |
| 200 | A | A | 0.0000 | |
| 201 | Y | A | 0.0000 | |
| 202 | L | A | 0.0000 | |
| 203 | E | A | 0.0000 | |
| 204 | L | A | 0.0000 | |
| 205 | R | A | -1.5731 | |
| 206 | R | A | -2.5675 | |
| 207 | E | A | -1.7926 | |
| 208 | G | A | -0.5686 | |
| 209 | H | A | 0.0000 | |
| 210 | F | A | 1.8493 | |
| 211 | A | A | 0.3350 | |
| 212 | P | A | 0.0000 | |
| 213 | N | A | 0.1958 | |
| 214 | S | A | -0.1377 | |
| 215 | S | A | -0.3740 | |
| 216 | N | A | -0.4063 | |
| 217 | T | A | -0.5400 | |
| 218 | L | A | -0.0421 | |
| 219 | I | A | 0.0000 | |
| 220 | A | A | 0.0000 | |
| 221 | K | A | 0.0000 | |
| 222 | Y | A | 0.0000 | |
| 223 | S | A | 0.0000 | |
| 224 | V | A | 0.0000 | |
| 225 | S | A | 0.0000 | |
| 226 | W | A | 0.0000 | |
| 227 | L | A | 0.0000 | |
| 228 | K | A | 0.0000 | |
| 229 | R | A | -0.7407 | |
| 230 | Y | A | 0.0000 | |
| 231 | V | A | 0.0000 | |
| 232 | D | A | 0.0000 | |
| 233 | N | A | -1.5223 | |
| 234 | D | A | 0.0000 | |
| 235 | L | A | 0.4729 | |
| 236 | R | A | -0.7256 | |
| 237 | Y | A | 0.0000 | |
| 238 | D | A | -1.1942 | |
| 239 | Q | A | -1.8061 | |
| 240 | F | A | 0.0000 | |
| 241 | I | A | 0.0000 | |
| 242 | D | A | -1.8210 | |
| 243 | P | A | -1.5387 | |
| 244 | G | A | -1.4034 | |
| 245 | P | A | -1.3084 | |
| 246 | R | A | -2.0536 | |
| 247 | T | A | -0.8240 | |
| 248 | G | A | 0.1933 | |
| 249 | I | A | 1.6006 | |
| 250 | T | A | 0.5292 | |
| 251 | T | A | -0.0875 | |
| 252 | G | A | -0.7144 | |
| 253 | V | A | 0.0000 | |
| 254 | S | A | -0.7516 | |
| 255 | D | A | -0.8599 | |
| 256 | Y | A | -0.5311 | |
| 257 | R | A | -0.7493 | |
| 258 | L | A | -0.4232 | |
| 259 | G | A | -1.0637 |