| Chain sequence(s) |
A: GCLGEGEKCADWSGPSCCDGFYCSCRSMPYCRCRNNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:18)
[INFO] Main: Simulation completed successfully. (00:00:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2808 | |
| 2 | C | A | -0.4672 | |
| 3 | L | A | -1.2762 | |
| 4 | G | A | -2.1793 | |
| 5 | E | A | -3.4806 | |
| 6 | G | A | -3.1144 | |
| 7 | E | A | -3.6787 | |
| 8 | K | A | -3.4834 | |
| 9 | C | A | 0.0000 | |
| 10 | A | A | -1.3920 | |
| 11 | D | A | -1.3610 | |
| 12 | W | A | 0.1655 | |
| 13 | S | A | -0.2784 | |
| 14 | G | A | -0.6621 | |
| 15 | P | A | -1.0262 | |
| 16 | S | A | -0.6911 | |
| 17 | C | A | 0.0000 | |
| 18 | C | A | -1.4848 | |
| 19 | D | A | -2.3058 | |
| 20 | G | A | -2.2797 | |
| 21 | F | A | -2.2395 | |
| 22 | Y | A | -1.1843 | |
| 23 | C | A | -1.1256 | |
| 24 | S | A | -0.8929 | |
| 25 | C | A | -1.0179 | |
| 26 | R | A | -1.6368 | |
| 27 | S | A | -0.5977 | |
| 28 | M | A | 0.3237 | |
| 29 | P | A | 0.4361 | |
| 30 | Y | A | 0.8398 | |
| 31 | C | A | -0.7066 | |
| 32 | R | A | -2.6400 | |
| 33 | C | A | -2.7121 | |
| 34 | R | A | -3.0361 | |
| 35 | N | A | -3.0575 | |
| 36 | N | A | -2.5260 | |
| 37 | S | A | -1.3900 |