| Chain sequence(s) |
A: GPLGSDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNPVDLSGEWLCPRCTCPALKGK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:25)
[INFO] Main: Simulation completed successfully. (00:00:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.3114 | |
| 2 | P | A | 0.1601 | |
| 3 | L | A | 0.8198 | |
| 4 | G | A | -0.6449 | |
| 5 | S | A | -1.5680 | |
| 6 | D | A | -2.5757 | |
| 7 | H | A | -2.3706 | |
| 8 | H | A | -1.7324 | |
| 9 | M | A | -1.3857 | |
| 10 | E | A | -2.6219 | |
| 11 | F | A | -1.9108 | |
| 12 | C | A | 0.0000 | |
| 13 | R | A | -1.0009 | |
| 14 | V | A | 0.7807 | |
| 15 | C | A | -0.1081 | |
| 16 | K | A | -2.2226 | |
| 17 | D | A | -2.8856 | |
| 18 | G | A | -2.5258 | |
| 19 | G | A | -2.0307 | |
| 20 | E | A | -2.2895 | |
| 21 | L | A | -1.2286 | |
| 22 | L | A | 0.0000 | |
| 23 | C | A | -0.8420 | |
| 24 | C | A | 0.0000 | |
| 25 | D | A | -2.2899 | |
| 26 | T | A | -1.1397 | |
| 27 | C | A | -0.9015 | |
| 28 | P | A | -1.4465 | |
| 29 | S | A | 0.0000 | |
| 30 | S | A | 0.0000 | |
| 31 | Y | A | 0.0000 | |
| 32 | H | A | -1.1450 | |
| 33 | I | A | 0.0000 | |
| 34 | H | A | -1.3925 | |
| 35 | C | A | -0.2911 | |
| 36 | L | A | 0.0000 | |
| 37 | N | A | -1.6354 | |
| 38 | P | A | -1.2422 | |
| 39 | P | A | -1.3452 | |
| 40 | L | A | -0.7139 | |
| 41 | P | A | -0.9615 | |
| 42 | E | A | -1.7517 | |
| 43 | I | A | -0.2987 | |
| 44 | P | A | -0.7391 | |
| 45 | N | A | -1.3289 | |
| 46 | P | A | -0.8046 | |
| 47 | V | A | 0.2093 | |
| 48 | D | A | -1.2216 | |
| 49 | L | A | -0.2503 | |
| 50 | S | A | -0.6370 | |
| 51 | G | A | -1.4180 | |
| 52 | E | A | -2.2594 | |
| 53 | W | A | -1.0753 | |
| 54 | L | A | -0.4553 | |
| 55 | C | A | 0.0000 | |
| 56 | P | A | -0.9354 | |
| 57 | R | A | -1.4949 | |
| 58 | C | A | -0.6478 | |
| 59 | T | A | -0.1668 | |
| 60 | C | A | 0.2720 | |
| 61 | P | A | -0.0688 | |
| 62 | A | A | 0.1570 | |
| 63 | L | A | 0.4080 | |
| 64 | K | A | -1.6229 | |
| 65 | G | A | -1.3696 | |
| 66 | K | A | -2.1017 |