Project name: query_structure

Status: done

Started: 2026-03-16 23:27:24
Settings
Chain sequence(s) A: GPLGSDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNPVDLSGEWLCPRCTCPALKGK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:25)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:26)
Show buried residues

Minimal score value
-2.8856
Maximal score value
0.8198
Average score
-0.9485
Total score value
-62.6005

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.3114
2 P A 0.1601
3 L A 0.8198
4 G A -0.6449
5 S A -1.5680
6 D A -2.5757
7 H A -2.3706
8 H A -1.7324
9 M A -1.3857
10 E A -2.6219
11 F A -1.9108
12 C A 0.0000
13 R A -1.0009
14 V A 0.7807
15 C A -0.1081
16 K A -2.2226
17 D A -2.8856
18 G A -2.5258
19 G A -2.0307
20 E A -2.2895
21 L A -1.2286
22 L A 0.0000
23 C A -0.8420
24 C A 0.0000
25 D A -2.2899
26 T A -1.1397
27 C A -0.9015
28 P A -1.4465
29 S A 0.0000
30 S A 0.0000
31 Y A 0.0000
32 H A -1.1450
33 I A 0.0000
34 H A -1.3925
35 C A -0.2911
36 L A 0.0000
37 N A -1.6354
38 P A -1.2422
39 P A -1.3452
40 L A -0.7139
41 P A -0.9615
42 E A -1.7517
43 I A -0.2987
44 P A -0.7391
45 N A -1.3289
46 P A -0.8046
47 V A 0.2093
48 D A -1.2216
49 L A -0.2503
50 S A -0.6370
51 G A -1.4180
52 E A -2.2594
53 W A -1.0753
54 L A -0.4553
55 C A 0.0000
56 P A -0.9354
57 R A -1.4949
58 C A -0.6478
59 T A -0.1668
60 C A 0.2720
61 P A -0.0688
62 A A 0.1570
63 L A 0.4080
64 K A -1.6229
65 G A -1.3696
66 K A -2.1017
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Laboratory of Theory of Biopolymers 2018