| Chain sequence(s) |
A: MAQVQLVESGGGLVQHGGSLRLSCVTSGFTFDIHDMGWFRQAPGKERDIVARISKSGDITYYADSVKGRFIISRDNTKNTVYLQMNSLKPEDTAVYYCAATLRATITSFDEYVYRGQGTQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:29)
[INFO] Main: Simulation completed successfully. (00:02:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9279 | |
| 2 | A | A | 0.0993 | |
| 3 | Q | A | -0.6967 | |
| 4 | V | A | -0.0792 | |
| 5 | Q | A | -0.5060 | |
| 6 | L | A | 0.0000 | |
| 7 | V | A | 0.8712 | |
| 8 | E | A | 0.0703 | |
| 9 | S | A | -0.4409 | |
| 10 | G | A | -1.0120 | |
| 11 | G | A | -0.8120 | |
| 12 | G | A | -0.0770 | |
| 13 | L | A | 0.8386 | |
| 14 | V | A | 0.0000 | |
| 15 | Q | A | -1.7489 | |
| 16 | H | A | -2.3266 | |
| 17 | G | A | -1.7488 | |
| 18 | G | A | -1.1721 | |
| 19 | S | A | -1.2876 | |
| 20 | L | A | -1.0076 | |
| 21 | R | A | -1.9454 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.2266 | |
| 24 | C | A | 0.0000 | |
| 25 | V | A | 0.7470 | |
| 26 | T | A | 0.0000 | |
| 27 | S | A | -0.1682 | |
| 28 | G | A | 0.0012 | |
| 29 | F | A | 0.1506 | |
| 30 | T | A | -0.2267 | |
| 31 | F | A | 0.0000 | |
| 32 | D | A | -1.5361 | |
| 33 | I | A | 0.1014 | |
| 34 | H | A | 0.0000 | |
| 35 | D | A | 0.0000 | |
| 36 | M | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | 0.0000 | |
| 40 | R | A | -1.7245 | |
| 41 | Q | A | -2.3031 | |
| 42 | A | A | -2.1031 | |
| 43 | P | A | -1.5596 | |
| 44 | G | A | -1.9334 | |
| 45 | K | A | -3.4636 | |
| 46 | E | A | -3.7873 | |
| 47 | R | A | -3.3916 | |
| 48 | D | A | -3.0455 | |
| 49 | I | A | 0.0000 | |
| 50 | V | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | R | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | S | A | -0.3435 | |
| 55 | K | A | -1.1221 | |
| 56 | S | A | -1.0727 | |
| 57 | G | A | -1.1662 | |
| 58 | D | A | -1.0842 | |
| 59 | I | A | 1.0157 | |
| 60 | T | A | 0.8904 | |
| 61 | Y | A | 0.6933 | |
| 62 | Y | A | -0.5384 | |
| 63 | A | A | 0.0000 | |
| 64 | D | A | -2.4432 | |
| 65 | S | A | -1.8486 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -2.4110 | |
| 68 | G | A | -1.5636 | |
| 69 | R | A | -1.0367 | |
| 70 | F | A | 0.0000 | |
| 71 | I | A | 0.3071 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.2573 | |
| 74 | R | A | -1.3118 | |
| 75 | D | A | -1.7541 | |
| 76 | N | A | -2.4312 | |
| 77 | T | A | -1.8900 | |
| 78 | K | A | -2.3388 | |
| 79 | N | A | -2.0089 | |
| 80 | T | A | -0.7667 | |
| 81 | V | A | 0.0000 | |
| 82 | Y | A | -0.2354 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -0.7488 | |
| 85 | M | A | 0.0000 | |
| 86 | N | A | -1.1304 | |
| 87 | S | A | -1.2609 | |
| 88 | L | A | 0.0000 | |
| 89 | K | A | -2.3037 | |
| 90 | P | A | -2.0271 | |
| 91 | E | A | -2.3764 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -0.8936 | |
| 94 | A | A | 0.0000 | |
| 95 | V | A | -0.4908 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | 0.0000 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | T | A | 0.0000 | |
| 102 | L | A | 0.6407 | |
| 103 | R | A | -1.0616 | |
| 104 | A | A | -0.3692 | |
| 105 | T | A | -0.2288 | |
| 106 | I | A | -0.7385 | |
| 107 | T | A | -0.7630 | |
| 108 | S | A | -1.5894 | |
| 109 | F | A | -1.8473 | |
| 110 | D | A | -2.5537 | |
| 111 | E | A | -2.3249 | |
| 112 | Y | A | 0.0000 | |
| 113 | V | A | 0.6043 | |
| 114 | Y | A | -0.0095 | |
| 115 | R | A | -1.8026 | |
| 116 | G | A | 0.0000 | |
| 117 | Q | A | -1.4298 | |
| 118 | G | A | -0.9974 | |
| 119 | T | A | -0.8088 | |
| 120 | Q | A | -1.0285 | |
| 121 | V | A | 0.0000 | |
| 122 | T | A | -0.3848 | |
| 123 | V | A | 0.0000 | |
| 124 | S | A | -1.0257 |