Project name: query_structure

Status: done

Started: 2026-03-17 00:02:19
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Chain sequence(s) A: MAQVQLVESGGGLVQTGGSLKLSCTASVRTLSYYHVGWFRQAPGKEREFVAGIHRSGESTFYADSVKGRFTISRDNAKNTVHLQMNSLKPEDTAVYYCAQRVRGFFGPLRSTPSWYDYWGQGTQVTVS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:47)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:48)
Show buried residues

Minimal score value
-3.2988
Maximal score value
2.0756
Average score
-0.667
Total score value
-85.3803

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.8296
2 A A -0.0544
3 Q A -0.9591
4 V A -0.6911
5 Q A -0.8610
6 L A 0.0000
7 V A 1.1015
8 E A -0.0273
9 S A -0.6401
10 G A -1.0264
11 G A -0.8225
12 G A -0.0403
13 L A 1.0094
14 V A -0.0213
15 Q A -1.2387
16 T A -1.4516
17 G A -1.3499
18 G A -0.8985
19 S A -1.1484
20 L A -0.8766
21 K A -1.8949
22 L A 0.0000
23 S A -0.4998
24 C A 0.0000
25 T A -0.3459
26 A A 0.0000
27 S A -0.5651
28 V A -0.9207
29 R A -1.7933
30 T A -0.5677
31 L A 0.0000
32 S A -0.5997
33 Y A 0.5225
34 Y A 0.1728
35 H A -0.0697
36 V A 0.0000
37 G A 0.0000
38 W A 0.0000
39 F A 0.0000
40 R A 0.0000
41 Q A -1.8498
42 A A -1.8970
43 P A -1.3828
44 G A -1.9270
45 K A -3.2068
46 E A -3.2988
47 R A -2.3027
48 E A -1.5415
49 F A -0.7124
50 V A 0.0000
51 A A 0.0000
52 G A 0.0000
53 I A 0.0000
54 H A -0.8647
55 R A -1.1846
56 S A -1.3185
57 G A -1.8014
58 E A -2.2496
59 S A -1.1693
60 T A -0.4206
61 F A 0.1057
62 Y A -0.7137
63 A A -1.4126
64 D A -2.3662
65 S A -1.8067
66 V A 0.0000
67 K A -2.5379
68 G A -1.7917
69 R A -1.3707
70 F A 0.0000
71 T A -0.7450
72 I A 0.0000
73 S A -0.7994
74 R A -1.2005
75 D A -1.5088
76 N A -1.8049
77 A A -1.5359
78 K A -2.3415
79 N A 0.0000
80 T A -1.0834
81 V A 0.0000
82 H A -0.9350
83 L A 0.0000
84 Q A -1.0992
85 M A 0.0000
86 N A -1.3272
87 S A -1.2074
88 L A 0.0000
89 K A -2.2582
90 P A -1.9089
91 E A -2.3471
92 D A 0.0000
93 T A -0.9551
94 A A 0.0000
95 V A -0.6251
96 Y A 0.0000
97 Y A -0.1855
98 C A 0.0000
99 A A 0.0000
100 Q A 0.0000
101 R A 0.0000
102 V A -0.5111
103 R A -1.2167
104 G A -0.1413
105 F A 1.5501
106 F A 2.0756
107 G A 0.9079
108 P A -0.0807
109 L A 0.0000
110 R A -1.1452
111 S A -0.6686
112 T A -0.4376
113 P A -0.5534
114 S A -0.3300
115 W A -0.1041
116 Y A 0.0000
117 D A -1.5008
118 Y A -0.4240
119 W A -0.1453
120 G A -0.1096
121 Q A -1.0448
122 G A -0.5877
123 T A 0.0000
124 Q A -1.2195
125 V A 0.0000
126 T A -0.3242
127 V A 0.0000
128 S A -0.7517
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Laboratory of Theory of Biopolymers 2018