| Chain sequence(s) |
A: MAQVQLVESGGGLVQTGGSLKLSCTASVRTLSYYHVGWFRQAPGKEREFVAGIHRSGESTFYADSVKGRFTISRDNAKNTVHLQMNSLKPEDTAVYYCAQRVRGFFGPLRSTPSWYDYWGQGTQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:47)
[INFO] Main: Simulation completed successfully. (00:01:48)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.8296 | |
| 2 | A | A | -0.0544 | |
| 3 | Q | A | -0.9591 | |
| 4 | V | A | -0.6911 | |
| 5 | Q | A | -0.8610 | |
| 6 | L | A | 0.0000 | |
| 7 | V | A | 1.1015 | |
| 8 | E | A | -0.0273 | |
| 9 | S | A | -0.6401 | |
| 10 | G | A | -1.0264 | |
| 11 | G | A | -0.8225 | |
| 12 | G | A | -0.0403 | |
| 13 | L | A | 1.0094 | |
| 14 | V | A | -0.0213 | |
| 15 | Q | A | -1.2387 | |
| 16 | T | A | -1.4516 | |
| 17 | G | A | -1.3499 | |
| 18 | G | A | -0.8985 | |
| 19 | S | A | -1.1484 | |
| 20 | L | A | -0.8766 | |
| 21 | K | A | -1.8949 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.4998 | |
| 24 | C | A | 0.0000 | |
| 25 | T | A | -0.3459 | |
| 26 | A | A | 0.0000 | |
| 27 | S | A | -0.5651 | |
| 28 | V | A | -0.9207 | |
| 29 | R | A | -1.7933 | |
| 30 | T | A | -0.5677 | |
| 31 | L | A | 0.0000 | |
| 32 | S | A | -0.5997 | |
| 33 | Y | A | 0.5225 | |
| 34 | Y | A | 0.1728 | |
| 35 | H | A | -0.0697 | |
| 36 | V | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | 0.0000 | |
| 40 | R | A | 0.0000 | |
| 41 | Q | A | -1.8498 | |
| 42 | A | A | -1.8970 | |
| 43 | P | A | -1.3828 | |
| 44 | G | A | -1.9270 | |
| 45 | K | A | -3.2068 | |
| 46 | E | A | -3.2988 | |
| 47 | R | A | -2.3027 | |
| 48 | E | A | -1.5415 | |
| 49 | F | A | -0.7124 | |
| 50 | V | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | G | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | H | A | -0.8647 | |
| 55 | R | A | -1.1846 | |
| 56 | S | A | -1.3185 | |
| 57 | G | A | -1.8014 | |
| 58 | E | A | -2.2496 | |
| 59 | S | A | -1.1693 | |
| 60 | T | A | -0.4206 | |
| 61 | F | A | 0.1057 | |
| 62 | Y | A | -0.7137 | |
| 63 | A | A | -1.4126 | |
| 64 | D | A | -2.3662 | |
| 65 | S | A | -1.8067 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -2.5379 | |
| 68 | G | A | -1.7917 | |
| 69 | R | A | -1.3707 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -0.7450 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.7994 | |
| 74 | R | A | -1.2005 | |
| 75 | D | A | -1.5088 | |
| 76 | N | A | -1.8049 | |
| 77 | A | A | -1.5359 | |
| 78 | K | A | -2.3415 | |
| 79 | N | A | 0.0000 | |
| 80 | T | A | -1.0834 | |
| 81 | V | A | 0.0000 | |
| 82 | H | A | -0.9350 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -1.0992 | |
| 85 | M | A | 0.0000 | |
| 86 | N | A | -1.3272 | |
| 87 | S | A | -1.2074 | |
| 88 | L | A | 0.0000 | |
| 89 | K | A | -2.2582 | |
| 90 | P | A | -1.9089 | |
| 91 | E | A | -2.3471 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -0.9551 | |
| 94 | A | A | 0.0000 | |
| 95 | V | A | -0.6251 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | -0.1855 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | Q | A | 0.0000 | |
| 101 | R | A | 0.0000 | |
| 102 | V | A | -0.5111 | |
| 103 | R | A | -1.2167 | |
| 104 | G | A | -0.1413 | |
| 105 | F | A | 1.5501 | |
| 106 | F | A | 2.0756 | |
| 107 | G | A | 0.9079 | |
| 108 | P | A | -0.0807 | |
| 109 | L | A | 0.0000 | |
| 110 | R | A | -1.1452 | |
| 111 | S | A | -0.6686 | |
| 112 | T | A | -0.4376 | |
| 113 | P | A | -0.5534 | |
| 114 | S | A | -0.3300 | |
| 115 | W | A | -0.1041 | |
| 116 | Y | A | 0.0000 | |
| 117 | D | A | -1.5008 | |
| 118 | Y | A | -0.4240 | |
| 119 | W | A | -0.1453 | |
| 120 | G | A | -0.1096 | |
| 121 | Q | A | -1.0448 | |
| 122 | G | A | -0.5877 | |
| 123 | T | A | 0.0000 | |
| 124 | Q | A | -1.2195 | |
| 125 | V | A | 0.0000 | |
| 126 | T | A | -0.3242 | |
| 127 | V | A | 0.0000 | |
| 128 | S | A | -0.7517 |