| Chain sequence(s) |
A: PVQNRCIGVFGLSVYTTQQKIRDIFSRFGPIERIQVVIDAQTGRSRGFCFIYYDDIADAKAAKDACSGMEIDDRRIRVDYSTTQRPHTP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | 0.1756 | |
| 2 | V | A | 1.0162 | |
| 3 | Q | A | -0.7352 | |
| 4 | N | A | -1.0581 | |
| 5 | R | A | -2.2156 | |
| 6 | C | A | 0.0000 | |
| 7 | I | A | 0.0000 | |
| 8 | G | A | 0.0000 | |
| 9 | V | A | 0.0000 | |
| 10 | F | A | -0.7764 | |
| 11 | G | A | -1.5151 | |
| 12 | L | A | 0.0000 | |
| 13 | S | A | -0.6414 | |
| 14 | V | A | 0.6009 | |
| 15 | Y | A | 1.1479 | |
| 16 | T | A | 0.0000 | |
| 17 | T | A | -0.7911 | |
| 18 | Q | A | -2.1504 | |
| 19 | Q | A | -2.7280 | |
| 20 | K | A | -2.5787 | |
| 21 | I | A | 0.0000 | |
| 22 | R | A | -2.9467 | |
| 23 | D | A | -3.1617 | |
| 24 | I | A | -1.6522 | |
| 25 | F | A | 0.0000 | |
| 26 | S | A | -1.8417 | |
| 27 | R | A | -2.1535 | |
| 28 | F | A | -0.6992 | |
| 29 | G | A | -1.2680 | |
| 30 | P | A | -1.9892 | |
| 31 | I | A | 0.0000 | |
| 32 | E | A | -3.3066 | |
| 33 | R | A | -2.7195 | |
| 34 | I | A | -1.6262 | |
| 35 | Q | A | -0.9294 | |
| 36 | V | A | -0.4176 | |
| 37 | V | A | 0.2006 | |
| 38 | I | A | 0.2175 | |
| 39 | D | A | -0.9383 | |
| 40 | A | A | -0.8202 | |
| 41 | Q | A | -1.4569 | |
| 42 | T | A | -1.4436 | |
| 43 | G | A | -1.4736 | |
| 44 | R | A | -1.7836 | |
| 45 | S | A | -0.5769 | |
| 46 | R | A | -1.4868 | |
| 47 | G | A | -0.3580 | |
| 48 | F | A | 0.1577 | |
| 49 | C | A | 0.0000 | |
| 50 | F | A | 0.0398 | |
| 51 | I | A | 0.0000 | |
| 52 | Y | A | -1.7439 | |
| 53 | Y | A | 0.0000 | |
| 54 | D | A | -3.2987 | |
| 55 | D | A | -2.5472 | |
| 56 | I | A | -1.0173 | |
| 57 | A | A | -0.9106 | |
| 58 | D | A | -1.5359 | |
| 59 | A | A | 0.0000 | |
| 60 | K | A | -1.9557 | |
| 61 | A | A | -1.1184 | |
| 62 | A | A | 0.0000 | |
| 63 | K | A | -1.8822 | |
| 64 | D | A | -2.3087 | |
| 65 | A | A | -0.9716 | |
| 66 | C | A | 0.0000 | |
| 67 | S | A | -1.8881 | |
| 68 | G | A | -2.1028 | |
| 69 | M | A | -2.0414 | |
| 70 | E | A | -3.9849 | |
| 71 | I | A | 0.0000 | |
| 72 | D | A | -2.7222 | |
| 73 | D | A | -3.8877 | |
| 74 | R | A | -4.4670 | |
| 75 | R | A | -4.3011 | |
| 76 | I | A | 0.0000 | |
| 77 | R | A | -2.6058 | |
| 78 | V | A | 0.0000 | |
| 79 | D | A | -1.4731 | |
| 80 | Y | A | 0.0000 | |
| 81 | S | A | 0.0000 | |
| 82 | T | A | -0.6148 | |
| 83 | T | A | -1.3020 | |
| 84 | Q | A | -2.3727 | |
| 85 | R | A | -2.8962 | |
| 86 | P | A | -2.0280 | |
| 87 | H | A | -1.9377 | |
| 88 | T | A | -1.0399 | |
| 89 | P | A | -0.5993 |