| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVVYYVITYGETGHGGYYYQEFKVPGSKSTATISGLKPGVDYTITVYAYDDEYSSSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:56)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6165 | |
| 2 | S | A | 0.1741 | |
| 3 | D | A | -0.5738 | |
| 4 | V | A | -0.7730 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.6281 | |
| 7 | D | A | -3.5976 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1923 | |
| 10 | V | A | 0.0961 | |
| 11 | V | A | 1.5432 | |
| 12 | A | A | 0.9007 | |
| 13 | A | A | 0.3112 | |
| 14 | T | A | -0.3470 | |
| 15 | P | A | -1.1377 | |
| 16 | T | A | -1.0049 | |
| 17 | S | A | -0.5332 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7527 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.2014 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.3863 | |
| 24 | A | A | -1.7769 | |
| 25 | P | A | 0.0000 | |
| 26 | A | A | 0.1642 | |
| 27 | V | A | 0.7042 | |
| 28 | T | A | 0.0558 | |
| 29 | V | A | 0.2049 | |
| 30 | V | A | 0.2300 | |
| 31 | Y | A | -0.1778 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | -0.5549 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.8692 | |
| 36 | Y | A | -0.5261 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.4416 | |
| 39 | T | A | -1.3059 | |
| 40 | G | A | -1.2260 | |
| 41 | H | A | -1.0715 | |
| 42 | G | A | -0.5160 | |
| 43 | G | A | 0.0298 | |
| 44 | Y | A | 1.3983 | |
| 45 | Y | A | 1.1331 | |
| 46 | Y | A | 0.1584 | |
| 47 | Q | A | -1.1191 | |
| 48 | E | A | -2.0614 | |
| 49 | F | A | -1.2841 | |
| 50 | K | A | -1.6351 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -0.7418 | |
| 53 | G | A | -0.4463 | |
| 54 | S | A | -0.8499 | |
| 55 | K | A | -1.8701 | |
| 56 | S | A | -1.4024 | |
| 57 | T | A | -0.7605 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2428 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.6553 | |
| 62 | G | A | -1.0288 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.3821 | |
| 65 | P | A | -1.6861 | |
| 66 | G | A | -1.4781 | |
| 67 | V | A | -1.4536 | |
| 68 | D | A | -2.2387 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -0.9870 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | 0.0000 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | 0.1993 | |
| 75 | A | A | 0.0000 | |
| 76 | Y | A | -0.1799 | |
| 77 | D | A | -1.0820 | |
| 78 | D | A | -2.2717 | |
| 79 | E | A | -2.1193 | |
| 80 | Y | A | -0.3682 | |
| 81 | S | A | -0.2407 | |
| 82 | S | A | 0.0000 | |
| 83 | S | A | -0.1588 | |
| 84 | P | A | -0.2505 | |
| 85 | I | A | -0.2734 | |
| 86 | S | A | -0.6883 | |
| 87 | I | A | -0.7167 | |
| 88 | N | A | -1.7369 | |
| 89 | Y | A | -1.4858 | |
| 90 | R | A | -2.5668 | |
| 91 | T | A | -1.6617 |