| Chain sequence(s) |
A: RAGPGFLGNVLVDPTAVIGQNCTIGPNVTIGAGVVLEDGVRVKRCTILKGAHIRSHSWLESCIVGWSSSVGQWVRMENVTVLGEDVIVNDELYINGANVLPHKSITDSVPEPRIIM
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:10)
[INFO] Main: Simulation completed successfully. (00:01:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -1.5283 | |
| 2 | A | A | -0.7719 | |
| 3 | G | A | -0.5380 | |
| 4 | P | A | -0.3530 | |
| 5 | G | A | -0.6247 | |
| 6 | F | A | -0.1976 | |
| 7 | L | A | -0.0640 | |
| 8 | G | A | -0.9864 | |
| 9 | N | A | -1.7095 | |
| 10 | V | A | -0.6533 | |
| 11 | L | A | 0.6027 | |
| 12 | V | A | 0.3488 | |
| 13 | D | A | -0.3679 | |
| 14 | P | A | -0.2565 | |
| 15 | T | A | -0.0355 | |
| 16 | A | A | 0.0000 | |
| 17 | V | A | 1.8718 | |
| 18 | I | A | 0.6410 | |
| 19 | G | A | -0.9173 | |
| 20 | Q | A | -2.2177 | |
| 21 | N | A | -2.3802 | |
| 22 | C | A | 0.0000 | |
| 23 | T | A | -0.6797 | |
| 24 | I | A | 0.0000 | |
| 25 | G | A | 0.0000 | |
| 26 | P | A | -1.4433 | |
| 27 | N | A | -2.0427 | |
| 28 | V | A | 0.0000 | |
| 29 | T | A | 0.0090 | |
| 30 | I | A | 0.0000 | |
| 31 | G | A | -0.4651 | |
| 32 | A | A | -0.5945 | |
| 33 | G | A | -0.5178 | |
| 34 | V | A | 0.0000 | |
| 35 | V | A | 0.5274 | |
| 36 | L | A | 0.0000 | |
| 37 | E | A | -1.3747 | |
| 38 | D | A | -2.2407 | |
| 39 | G | A | 0.0000 | |
| 40 | V | A | 0.0000 | |
| 41 | R | A | -1.4079 | |
| 42 | V | A | 0.0000 | |
| 43 | K | A | -1.5611 | |
| 44 | R | A | -1.9446 | |
| 45 | C | A | 0.0000 | |
| 46 | T | A | -0.1870 | |
| 47 | I | A | 0.0000 | |
| 48 | L | A | -0.4339 | |
| 49 | K | A | -1.6658 | |
| 50 | G | A | -1.1483 | |
| 51 | A | A | 0.0000 | |
| 52 | H | A | -0.2450 | |
| 53 | I | A | 0.0000 | |
| 54 | R | A | -1.2034 | |
| 55 | S | A | -1.5314 | |
| 56 | H | A | -1.6179 | |
| 57 | S | A | 0.0000 | |
| 58 | W | A | -0.7661 | |
| 59 | L | A | 0.0000 | |
| 60 | E | A | -1.1681 | |
| 61 | S | A | -0.6107 | |
| 62 | C | A | 0.0000 | |
| 63 | I | A | 1.0571 | |
| 64 | V | A | 0.0000 | |
| 65 | G | A | 0.0000 | |
| 66 | W | A | -0.3673 | |
| 67 | S | A | -0.9240 | |
| 68 | S | A | 0.0000 | |
| 69 | S | A | -0.3273 | |
| 70 | V | A | 0.0000 | |
| 71 | G | A | 0.0000 | |
| 72 | Q | A | -1.5291 | |
| 73 | W | A | -0.7236 | |
| 74 | V | A | 0.0000 | |
| 75 | R | A | -1.5758 | |
| 76 | M | A | 0.0000 | |
| 77 | E | A | -0.9463 | |
| 78 | N | A | -0.9036 | |
| 79 | V | A | 0.9476 | |
| 80 | T | A | 0.0000 | |
| 81 | V | A | 0.9265 | |
| 82 | L | A | 0.0000 | |
| 83 | G | A | -0.5277 | |
| 84 | E | A | -1.4516 | |
| 85 | D | A | -1.4943 | |
| 86 | V | A | 0.0000 | |
| 87 | I | A | -0.3304 | |
| 88 | V | A | 0.0000 | |
| 89 | N | A | -2.0315 | |
| 90 | D | A | -2.2742 | |
| 91 | E | A | -2.6079 | |
| 92 | L | A | 0.0000 | |
| 93 | Y | A | -1.3228 | |
| 94 | I | A | 0.0000 | |
| 95 | N | A | -1.4956 | |
| 96 | G | A | -0.8425 | |
| 97 | A | A | 0.0000 | |
| 98 | N | A | 0.4560 | |
| 99 | V | A | 0.0000 | |
| 100 | L | A | 0.2666 | |
| 101 | P | A | -0.9323 | |
| 102 | H | A | -1.5983 | |
| 103 | K | A | -0.9640 | |
| 104 | S | A | -0.8769 | |
| 105 | I | A | 0.0000 | |
| 106 | T | A | -1.6314 | |
| 107 | D | A | -2.3742 | |
| 108 | S | A | -1.8213 | |
| 109 | V | A | 0.0000 | |
| 110 | P | A | -1.6648 | |
| 111 | E | A | -2.4696 | |
| 112 | P | A | -1.7534 | |
| 113 | R | A | -1.2929 | |
| 114 | I | A | 1.2223 | |
| 115 | I | A | 1.1120 | |
| 116 | M | A | 1.3146 |