| Chain sequence(s) |
H: QVQLQQPGAEFVRPGASVKLSCKASGYTFTNYWIHWVKQRPGRGLEWIGRIIPYSGDTNYNERFKSRATLTSAKSSSTAYMQLSSLTSEDSAVYFCARPDYWGQGTTLTVSS
L: DIQMTQSPSSLSASLGERVSLTCRASHEISKYLSWLQQKPDGTIKRLINAAVILDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYASYPWTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:25)
[INFO] Main: Simulation completed successfully. (00:01:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.4301 | |
| 2 | V | H | -0.9003 | |
| 3 | Q | H | -1.5085 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.9069 | |
| 6 | Q | H | -1.3854 | |
| 7 | P | H | -1.0970 | |
| 8 | G | H | -1.0521 | |
| 9 | A | H | -0.1841 | |
| 11 | E | H | -0.2629 | |
| 12 | F | H | 1.1386 | |
| 13 | V | H | -0.1761 | |
| 14 | R | H | -1.7077 | |
| 15 | P | H | -1.4289 | |
| 16 | G | H | -1.1524 | |
| 17 | A | H | -0.9087 | |
| 18 | S | H | -1.1121 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.9468 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.8143 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.4528 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.0472 | |
| 27 | G | H | -0.8873 | |
| 28 | Y | H | -0.4390 | |
| 29 | T | H | -0.2235 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.0439 | |
| 36 | N | H | -0.5401 | |
| 37 | Y | H | 0.4159 | |
| 38 | W | H | 0.4224 | |
| 39 | I | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -0.9959 | |
| 45 | R | H | -1.6858 | |
| 46 | P | H | -1.2717 | |
| 47 | G | H | -1.6542 | |
| 48 | R | H | -2.5525 | |
| 49 | G | H | -1.5859 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7475 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | R | H | -0.3535 | |
| 56 | I | H | 0.0000 | |
| 57 | I | H | 0.0997 | |
| 58 | P | H | 0.0000 | |
| 59 | Y | H | 0.6434 | |
| 62 | S | H | -0.2828 | |
| 63 | G | H | -0.7783 | |
| 64 | D | H | -1.6216 | |
| 65 | T | H | -1.0322 | |
| 66 | N | H | -1.0977 | |
| 67 | Y | H | -1.1776 | |
| 68 | N | H | 0.0000 | |
| 69 | E | H | -3.3983 | |
| 70 | R | H | -3.2330 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.0327 | |
| 74 | S | H | -1.8576 | |
| 75 | R | H | -1.4817 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.8491 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.5670 | |
| 80 | S | H | -0.4384 | |
| 81 | A | H | -0.7234 | |
| 82 | K | H | -1.1022 | |
| 83 | S | H | -0.8183 | |
| 84 | S | H | -0.7418 | |
| 85 | S | H | -0.8172 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.3224 | |
| 89 | M | H | 0.0000 | |
| 90 | Q | H | -1.1996 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.8710 | |
| 93 | S | H | -0.8605 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.2831 | |
| 96 | S | H | -1.4703 | |
| 97 | E | H | -2.0286 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.6645 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.1220 | |
| 102 | Y | H | 0.0000 | |
| 103 | F | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | P | H | -0.0292 | |
| 116 | D | H | -0.3386 | |
| 117 | Y | H | 0.0880 | |
| 118 | W | H | -0.3518 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.7415 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | -0.1818 | |
| 124 | L | H | 0.0000 | |
| 125 | T | H | -0.0349 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5615 | |
| 128 | S | H | -0.7577 | |
| 1 | D | L | -2.3083 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.2189 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.3345 | |
| 6 | Q | L | -1.0591 | |
| 7 | S | L | -0.8481 | |
| 8 | P | L | -0.5875 | |
| 9 | S | L | -0.8635 | |
| 10 | S | L | -0.9014 | |
| 11 | L | L | -0.2749 | |
| 12 | S | L | -0.3869 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.4359 | |
| 15 | L | L | 0.0527 | |
| 16 | G | L | -1.0972 | |
| 17 | E | L | -1.7135 | |
| 18 | R | L | -2.2820 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.7098 | |
| 21 | L | L | 0.0000 | |
| 22 | T | L | -0.8046 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.7992 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.1362 | |
| 27 | H | L | -2.5441 | |
| 28 | E | L | -2.3451 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.8322 | |
| 37 | K | L | -0.6221 | |
| 38 | Y | L | 0.7181 | |
| 39 | L | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | L | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.6208 | |
| 46 | P | L | -1.4331 | |
| 47 | D | L | -2.2686 | |
| 48 | G | L | -1.5559 | |
| 49 | T | L | -1.3228 | |
| 50 | I | L | 0.0000 | |
| 51 | K | L | -0.9859 | |
| 52 | R | L | -0.7625 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | N | L | 0.7344 | |
| 56 | A | L | 0.8611 | |
| 57 | A | L | 0.0000 | |
| 65 | V | L | 1.5662 | |
| 66 | I | L | 2.3946 | |
| 67 | L | L | 0.9094 | |
| 68 | D | L | -0.1102 | |
| 69 | S | L | -0.3181 | |
| 70 | G | L | -0.8347 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -1.1198 | |
| 74 | K | L | -1.9308 | |
| 75 | R | L | -1.5632 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.0291 | |
| 78 | G | L | 0.4727 | |
| 79 | S | L | -0.2206 | |
| 80 | R | L | -1.2891 | |
| 83 | S | L | -1.1272 | |
| 84 | G | L | -1.3050 | |
| 85 | S | L | -1.9130 | |
| 86 | D | L | -1.6915 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | -0.6187 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6819 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.6110 | |
| 93 | S | L | -1.3987 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -1.7124 | |
| 96 | S | L | -1.0771 | |
| 97 | E | L | -1.9694 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.5671 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -1.3296 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | L | L | 0.2710 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.7900 | |
| 108 | A | L | 0.1765 | |
| 109 | S | L | 0.0429 | |
| 114 | Y | L | 0.1052 | |
| 115 | P | L | -0.7066 | |
| 116 | W | L | 0.0607 | |
| 117 | T | L | -0.3769 | |
| 118 | F | L | -0.1509 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.0794 | |
| 121 | G | L | -1.1799 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.7395 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.2462 | |
| 126 | I | L | 1.1421 | |
| 127 | K | L | -0.7280 |