| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFSDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEVQHETADVRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPDGHPLPADPPPSPLYVPPPPDSPYATPPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPLPAVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9433 | |
| 2 | L | A | 1.9643 | |
| 3 | P | A | 0.6526 | |
| 4 | P | A | 0.3661 | |
| 5 | T | A | 0.1219 | |
| 6 | T | A | 0.1267 | |
| 7 | P | A | 0.1609 | |
| 8 | V | A | 1.2356 | |
| 9 | A | A | 0.0783 | |
| 10 | K | A | -1.0346 | |
| 11 | V | A | -0.1824 | |
| 12 | Q | A | -1.4146 | |
| 13 | S | A | -1.5579 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4005 | |
| 16 | E | A | -2.4301 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4610 | |
| 20 | P | A | 0.1296 | |
| 21 | T | A | 0.1587 | |
| 22 | S | A | -0.0959 | |
| 23 | L | A | 0.0951 | |
| 24 | F | A | -0.0250 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2976 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9026 | |
| 31 | R | A | -2.6808 | |
| 32 | L | A | -0.7970 | |
| 33 | L | A | 1.1576 | |
| 34 | T | A | 1.3624 | |
| 35 | V | A | 1.8139 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.2328 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.1697 | |
| 40 | S | A | -0.0315 | |
| 41 | D | A | -0.1118 | |
| 42 | I | A | 1.4311 | |
| 43 | V | A | 1.3000 | |
| 44 | K | A | -1.1357 | |
| 45 | N | A | -1.9318 | |
| 46 | G | A | -1.2115 | |
| 47 | K | A | -0.9573 | |
| 48 | V | A | 1.6228 | |
| 49 | V | A | 2.0675 | |
| 50 | V | A | 1.5123 | |
| 51 | P | A | 0.7683 | |
| 52 | K | A | -0.0576 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1667 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3725 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2642 | |
| 70 | K | A | -1.7859 | |
| 71 | F | A | -0.6364 | |
| 72 | A | A | -0.5729 | |
| 73 | L | A | -0.8579 | |
| 74 | P | A | -1.2688 | |
| 75 | Q | A | -2.5002 | |
| 76 | K | A | -3.1046 | |
| 77 | D | A | -2.9849 | |
| 78 | F | A | -1.6622 | |
| 79 | Y | A | -1.8754 | |
| 80 | D | A | -2.6762 | |
| 81 | P | A | -2.2934 | |
| 82 | E | A | -3.0401 | |
| 83 | K | A | -3.3921 | |
| 84 | E | A | -2.4535 | |
| 85 | R | A | -1.2828 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6438 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9764 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3595 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6890 | |
| 99 | G | A | -0.5271 | |
| 100 | P | A | -0.3777 | |
| 101 | L | A | 0.0968 | |
| 102 | G | A | -0.1751 | |
| 103 | K | A | -0.5831 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4297 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1453 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4242 | |
| 110 | L | A | 0.4108 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9667 | |
| 113 | K | A | -0.3882 | |
| 114 | L | A | -1.0670 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.2335 | |
| 117 | T | A | -0.9567 | |
| 118 | E | A | -1.7314 | |
| 119 | N | A | -2.1517 | |
| 120 | P | A | -1.7513 | |
| 121 | T | A | -1.4671 | |
| 122 | E | A | -1.9620 | |
| 123 | V | A | -0.5969 | |
| 124 | Q | A | -1.4384 | |
| 125 | H | A | -1.9876 | |
| 126 | E | A | -2.4590 | |
| 127 | T | A | -1.7238 | |
| 128 | A | A | -1.2541 | |
| 129 | D | A | -2.0524 | |
| 130 | V | A | -1.3605 | |
| 131 | R | A | -0.7216 | |
| 132 | V | A | 0.4205 | |
| 133 | A | A | 0.4458 | |
| 134 | F | A | 0.2795 | |
| 135 | S | A | -0.0727 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5065 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5559 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2224 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1117 | |
| 157 | D | A | 0.2708 | |
| 158 | I | A | 0.8199 | |
| 159 | A | A | 0.1156 | |
| 160 | E | A | -1.4786 | |
| 161 | P | A | -0.2233 | |
| 162 | C | A | 0.1853 | |
| 163 | P | A | -0.1758 | |
| 164 | G | A | -0.0854 | |
| 165 | L | A | 0.5761 | |
| 166 | P | A | -0.1221 | |
| 167 | P | A | -0.3429 | |
| 168 | G | A | -0.4217 | |
| 169 | A | A | -0.0215 | |
| 170 | C | A | 0.7432 | |
| 171 | P | A | 0.5495 | |
| 172 | P | A | 0.7880 | |
| 173 | I | A | 2.0410 | |
| 174 | Q | A | 0.8390 | |
| 175 | L | A | 1.4297 | |
| 176 | V | A | 0.8220 | |
| 177 | N | A | -0.3143 | |
| 178 | S | A | 0.0199 | |
| 179 | V | A | 0.4267 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3834 | |
| 182 | D | A | 0.0752 | |
| 183 | G | A | -0.1563 | |
| 184 | D | A | -0.5518 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1531 | |
| 190 | F | A | 0.0659 | |
| 191 | G | A | -0.1008 | |
| 192 | N | A | -0.2774 | |
| 193 | M | A | -0.1514 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4004 | |
| 197 | E | A | -2.6239 | |
| 198 | L | A | -1.2277 | |
| 199 | Q | A | -2.5526 | |
| 200 | Q | A | -3.3133 | |
| 201 | D | A | -3.5821 | |
| 202 | R | A | -3.3371 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4649 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3659 | |
| 211 | S | A | -1.7210 | |
| 212 | T | A | -1.4643 | |
| 213 | R | A | -2.1485 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1632 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3089 | |
| 220 | L | A | 0.5897 | |
| 221 | K | A | -1.1396 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8977 | |
| 224 | N | A | -1.4990 | |
| 225 | E | A | -1.2318 | |
| 226 | A | A | -0.6027 | |
| 227 | Y | A | -0.4038 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6710 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1613 | |
| 234 | F | A | 0.0066 | |
| 235 | G | A | -0.9125 | |
| 236 | R | A | -2.6198 | |
| 237 | R | A | -2.8110 | |
| 238 | E | A | -2.0765 | |
| 239 | Q | A | -0.1039 | |
| 240 | V | A | 1.5038 | |
| 241 | Y | A | 1.2582 | |
| 242 | A | A | 0.1831 | |
| 243 | R | A | -1.1805 | |
| 244 | H | A | -0.9865 | |
| 245 | F | A | 0.0792 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5425 | |
| 249 | A | A | -1.2363 | |
| 250 | G | A | -1.0920 | |
| 251 | P | A | -1.1701 | |
| 252 | D | A | -1.4039 | |
| 253 | G | A | -1.2984 | |
| 254 | H | A | -1.4514 | |
| 255 | P | A | -0.9497 | |
| 256 | L | A | 0.1925 | |
| 257 | P | A | -0.0881 | |
| 258 | A | A | -0.1964 | |
| 259 | D | A | -0.6042 | |
| 260 | P | A | -0.7124 | |
| 261 | P | A | -0.2254 | |
| 262 | P | A | -0.0505 | |
| 263 | S | A | 0.3197 | |
| 264 | P | A | 0.5712 | |
| 265 | L | A | 1.8352 | |
| 266 | Y | A | 1.7694 | |
| 267 | V | A | 1.8895 | |
| 268 | P | A | 0.8106 | |
| 269 | P | A | 0.0927 | |
| 270 | P | A | -0.6618 | |
| 271 | P | A | -1.1616 | |
| 272 | D | A | -1.9108 | |
| 273 | S | A | -0.8759 | |
| 274 | P | A | -0.3135 | |
| 275 | Y | A | 0.5128 | |
| 276 | A | A | -0.2669 | |
| 277 | T | A | 0.0040 | |
| 278 | P | A | 0.1859 | |
| 279 | P | A | -0.5521 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.4859 | |
| 282 | D | A | -0.9209 | |
| 283 | Y | A | 0.9015 | |
| 284 | F | A | 0.6956 | |
| 285 | G | A | 0.2222 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8186 | |
| 291 | L | A | 1.6215 | |
| 292 | V | A | 0.6471 | |
| 293 | S | A | -0.1484 | |
| 294 | S | A | -0.9509 | |
| 295 | D | A | -1.8426 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1100 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6495 | |
| 301 | R | A | -1.8852 | |
| 302 | P | A | -0.9678 | |
| 303 | F | A | -0.2246 | |
| 304 | W | A | -0.5643 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0810 | |
| 307 | R | A | -2.9247 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6655 | |
| 310 | G | A | -1.4278 | |
| 311 | N | A | -1.3640 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7574 | |
| 319 | N | A | -0.8364 | |
| 320 | E | A | -1.0302 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3154 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0630 | |
| 333 | N | A | 0.5393 | |
| 334 | F | A | 1.7256 | |
| 335 | T | A | 0.8480 | |
| 336 | I | A | 0.3856 | |
| 337 | S | A | -0.9664 | |
| 338 | Q | A | -1.6287 | |
| 339 | Q | A | -0.7300 | |
| 340 | L | A | 0.7281 | |
| 341 | S | A | 0.5801 | |
| 342 | T | A | 0.4239 | |
| 343 | P | A | 0.5316 | |
| 344 | L | A | 1.8533 | |
| 345 | P | A | 1.3705 | |
| 346 | A | A | 1.4199 | |
| 347 | V | A | 2.3606 | |
| 348 | Y | A | 1.8534 | |
| 349 | D | A | 0.0304 | |
| 350 | P | A | -0.7069 | |
| 351 | S | A | -0.5410 | |
| 352 | N | A | -0.1031 | |
| 353 | F | A | -0.8077 | |
| 354 | K | A | -1.9618 | |
| 355 | N | A | -1.8077 | |
| 356 | Y | A | -0.1609 | |
| 357 | L | A | 0.6233 | |
| 358 | R | A | 0.9468 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3666 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0888 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0418 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6856 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3019 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3077 | |
| 376 | L | A | -1.7075 | |
| 377 | D | A | -1.9830 | |
| 378 | P | A | -1.0355 | |
| 379 | G | A | -1.0109 | |
| 380 | V | A | -0.9287 | |
| 381 | L | A | -0.5330 | |
| 382 | A | A | -0.6542 | |
| 383 | H | A | -0.8084 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3998 | |
| 386 | T | A | -0.5474 | |
| 387 | M | A | -0.2967 | |
| 388 | N | A | -0.8605 | |
| 389 | P | A | -1.2264 | |
| 390 | T | A | -1.3897 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.3606 | |
| 393 | E | A | -2.6729 | |
| 394 | N | A | -2.3864 | |
| 395 | W | A | -1.2460 | |
| 396 | N | A | -1.1115 | |
| 397 | L | A | -0.0953 | |
| 398 | G | A | 0.6048 | |
| 399 | F | A | 2.4357 | |
| 400 | V | A | 1.8374 | |
| 401 | P | A | 0.0666 | |
| 402 | P | A | -1.7813 | |
| 403 | K | A | -3.3795 | |
| 404 | E | A | -3.7957 | |
| 405 | R | A | -3.7883 | |
| 406 | E | A | -3.7319 | |
| 407 | D | A | -2.8524 | |
| 408 | P | A | -1.7541 | |
| 409 | Y | A | -0.9899 | |
| 410 | K | A | -2.1075 | |
| 411 | G | A | -0.6432 | |
| 412 | L | A | 0.6669 | |
| 413 | I | A | 1.5766 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4208 | |
| 416 | E | A | -1.7463 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9757 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0694 | |
| 421 | E | A | -2.8070 | |
| 422 | R | A | -2.6145 | |
| 423 | F | A | -1.2978 | |
| 424 | S | A | -1.4714 | |
| 425 | Q | A | -1.7494 | |
| 426 | D | A | -2.8967 | |
| 427 | L | A | -1.9851 | |
| 428 | D | A | -2.7820 | |
| 429 | Q | A | -2.6188 | |
| 430 | F | A | -1.4119 | |
| 431 | A | A | -0.8849 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5492 | |
| 435 | K | A | -0.6950 | |
| 436 | F | A | 0.1554 | |
| 437 | L | A | 1.0376 | |
| 438 | Y | A | 0.8346 | |
| 439 | Q | A | -0.2740 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine