| Chain sequence(s) |
A: GSSVPTNLEVVAATPTSLLISWDASYSSYVYYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAYSYYYYYYSSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:33)
[INFO] Main: Simulation completed successfully. (00:00:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1634 | |
| 2 | S | A | -0.0675 | |
| 3 | S | A | 0.0000 | |
| 4 | V | A | 0.3151 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.2553 | |
| 7 | N | A | -2.0392 | |
| 8 | L | A | -1.3274 | |
| 9 | E | A | -1.6234 | |
| 10 | V | A | 0.2816 | |
| 11 | V | A | 1.6168 | |
| 12 | A | A | 0.9358 | |
| 13 | A | A | 0.3438 | |
| 14 | T | A | -0.3304 | |
| 15 | P | A | -1.1159 | |
| 16 | T | A | -1.0054 | |
| 17 | S | A | -0.5111 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.8081 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.6985 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -1.9223 | |
| 24 | A | A | -0.7176 | |
| 25 | S | A | 0.3826 | |
| 26 | Y | A | 1.1590 | |
| 27 | S | A | 1.0775 | |
| 28 | S | A | 1.0970 | |
| 29 | Y | A | 2.4405 | |
| 30 | V | A | 2.2644 | |
| 31 | Y | A | 2.4644 | |
| 32 | Y | A | 0.9896 | |
| 33 | Y | A | 0.0000 | |
| 34 | R | A | -0.2825 | |
| 35 | I | A | 0.0000 | |
| 36 | T | A | -0.6453 | |
| 37 | Y | A | -0.4624 | |
| 38 | G | A | 0.0000 | |
| 39 | E | A | -1.9132 | |
| 40 | T | A | -1.4199 | |
| 41 | G | A | -1.3970 | |
| 42 | G | A | -1.3417 | |
| 43 | N | A | -1.7313 | |
| 44 | S | A | -0.9873 | |
| 45 | P | A | -0.4113 | |
| 46 | V | A | 0.2478 | |
| 47 | Q | A | -1.2530 | |
| 48 | E | A | -1.8383 | |
| 49 | F | A | -0.7334 | |
| 50 | T | A | -0.0690 | |
| 51 | V | A | -0.0841 | |
| 52 | P | A | -0.2201 | |
| 53 | G | A | 0.2494 | |
| 54 | S | A | -0.6045 | |
| 55 | K | A | -1.6741 | |
| 56 | S | A | -1.1258 | |
| 57 | T | A | -0.5659 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.1573 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.6536 | |
| 62 | G | A | -1.0265 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.4213 | |
| 65 | P | A | -1.7010 | |
| 66 | G | A | -1.4970 | |
| 67 | V | A | -1.5689 | |
| 68 | D | A | -2.1006 | |
| 69 | Y | A | -1.3436 | |
| 70 | T | A | -0.7860 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | 0.0000 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | 0.3738 | |
| 75 | A | A | 0.0000 | |
| 76 | Y | A | 2.2166 | |
| 77 | S | A | 0.0000 | |
| 78 | Y | A | 3.6545 | |
| 79 | Y | A | 3.3254 | |
| 80 | Y | A | 3.0303 | |
| 81 | Y | A | 3.2842 | |
| 82 | Y | A | 2.5785 | |
| 83 | Y | A | 1.5923 | |
| 84 | S | A | 0.0000 | |
| 85 | S | A | 0.1116 | |
| 86 | P | A | -0.0162 | |
| 87 | I | A | 0.0706 | |
| 88 | S | A | -0.4986 | |
| 89 | I | A | -0.5938 | |
| 90 | N | A | -1.6972 | |
| 91 | Y | A | -1.4513 | |
| 92 | R | A | -2.5488 | |
| 93 | T | A | -1.5083 |