| Chain sequence(s) |
H: QVQLLESGGGLVQPGGSLRLSCAASGFTFSTAAMSWVRQAPGKGLEWVSGISGSGSSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARELSYLYSGYYFDYWGQGTLVTVSS
L: QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNDVSWYQQLPGTAPKLLIYKNYNRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCSAWDQRQFDVVFGGGTKLTVL input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:35)
[INFO] Main: Simulation completed successfully. (00:02:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.4077 | |
| 2 | V | H | -0.7686 | |
| 3 | Q | H | -0.7695 | |
| 4 | L | H | 0.0000 | |
| 5 | L | H | 0.8326 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.3268 | |
| 8 | G | H | -0.6958 | |
| 9 | G | H | 0.1117 | |
| 10 | G | H | 0.6538 | |
| 11 | L | H | 1.3772 | |
| 12 | V | H | -0.1092 | |
| 13 | Q | H | -1.4659 | |
| 14 | P | H | -1.8796 | |
| 15 | G | H | -1.5650 | |
| 16 | G | H | -1.0520 | |
| 17 | S | H | -1.2493 | |
| 18 | L | H | -0.7574 | |
| 19 | R | H | -1.8318 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.3854 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.1595 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.8058 | |
| 26 | G | H | -0.9151 | |
| 27 | F | H | -0.3713 | |
| 28 | T | H | -0.2556 | |
| 29 | F | H | 0.0000 | |
| 30 | S | H | -0.6816 | |
| 31 | T | H | -0.2664 | |
| 32 | A | H | 0.0000 | |
| 33 | A | H | -0.1640 | |
| 34 | M | H | 0.0000 | |
| 35 | S | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -0.7686 | |
| 40 | A | H | -1.1427 | |
| 41 | P | H | -0.9983 | |
| 42 | G | H | -1.4581 | |
| 43 | K | H | -2.3708 | |
| 44 | G | H | -1.6246 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -1.5684 | |
| 47 | W | H | 0.0000 | |
| 48 | V | H | 0.0000 | |
| 49 | S | H | 0.0000 | |
| 50 | G | H | 0.0000 | |
| 51 | I | H | 0.0000 | |
| 52 | S | H | -0.3187 | |
| 53 | G | H | -0.4871 | |
| 54 | S | H | -0.6541 | |
| 55 | G | H | -0.6958 | |
| 56 | S | H | -0.4382 | |
| 57 | S | H | -0.2052 | |
| 58 | T | H | 0.0885 | |
| 59 | Y | H | 0.2950 | |
| 60 | Y | H | -0.6256 | |
| 61 | A | H | 0.0000 | |
| 62 | D | H | -2.6540 | |
| 63 | S | H | -1.9059 | |
| 64 | V | H | 0.0000 | |
| 65 | K | H | -2.6724 | |
| 66 | G | H | -1.8859 | |
| 67 | R | H | -1.7415 | |
| 68 | F | H | 0.0000 | |
| 69 | T | H | -0.7867 | |
| 70 | I | H | 0.0000 | |
| 71 | S | H | -0.4634 | |
| 72 | R | H | -1.1129 | |
| 73 | D | H | -1.8105 | |
| 74 | N | H | -1.9466 | |
| 75 | S | H | -1.7277 | |
| 76 | K | H | -2.4711 | |
| 77 | N | H | -1.8445 | |
| 78 | T | H | 0.0000 | |
| 79 | L | H | 0.0000 | |
| 80 | Y | H | -0.5335 | |
| 81 | L | H | 0.0000 | |
| 82 | Q | H | -1.1123 | |
| 83 | M | H | 0.0000 | |
| 84 | N | H | -1.5246 | |
| 85 | S | H | -1.5023 | |
| 86 | L | H | 0.0000 | |
| 87 | R | H | -3.0008 | |
| 88 | A | H | -2.1070 | |
| 89 | E | H | -2.5622 | |
| 90 | D | H | -1.6980 | |
| 91 | T | H | -0.5618 | |
| 92 | A | H | 0.0000 | |
| 93 | V | H | 0.8004 | |
| 94 | Y | H | 0.0000 | |
| 95 | Y | H | 0.0000 | |
| 96 | C | H | 0.0000 | |
| 97 | A | H | 0.0000 | |
| 98 | R | H | -0.0847 | |
| 99 | E | H | 0.0000 | |
| 100 | L | H | 0.5974 | |
| 101 | S | H | 0.8833 | |
| 102 | Y | H | 1.6000 | |
| 103 | L | H | 2.4977 | |
| 104 | Y | H | 2.2142 | |
| 105 | S | H | 1.0236 | |
| 106 | G | H | 0.0000 | |
| 107 | Y | H | 0.9434 | |
| 108 | Y | H | 0.0000 | |
| 109 | F | H | 0.0000 | |
| 110 | D | H | -0.2952 | |
| 111 | Y | H | -0.1146 | |
| 112 | W | H | -0.2642 | |
| 113 | G | H | 0.0000 | |
| 114 | Q | H | -0.7782 | |
| 115 | G | H | 0.0000 | |
| 116 | T | H | 0.5653 | |
| 117 | L | H | 1.6136 | |
| 118 | V | H | 0.0000 | |
| 119 | T | H | 0.2699 | |
| 120 | V | H | 0.0000 | |
| 121 | S | H | -0.7666 | |
| 122 | S | H | -0.4958 | |
| 123 | Q | L | -0.7890 | |
| 124 | S | L | -0.4968 | |
| 125 | V | L | 0.8737 | |
| 126 | L | L | 0.0000 | |
| 127 | T | L | 0.0198 | |
| 128 | Q | L | 0.0000 | |
| 129 | P | L | -0.6760 | |
| 130 | P | L | -0.9923 | |
| 131 | S | L | -1.1380 | |
| 132 | A | L | -0.7269 | |
| 133 | S | L | -0.5711 | |
| 134 | G | L | 0.0000 | |
| 135 | T | L | -0.3744 | |
| 136 | P | L | -0.9245 | |
| 137 | G | L | -1.7106 | |
| 138 | Q | L | -2.4564 | |
| 139 | R | L | -2.7241 | |
| 140 | V | L | 0.0000 | |
| 141 | T | L | -0.5979 | |
| 142 | I | L | 0.0000 | |
| 143 | S | L | -0.3658 | |
| 144 | C | L | 0.0000 | |
| 145 | S | L | -0.2814 | |
| 146 | G | L | -0.2505 | |
| 147 | S | L | -0.4827 | |
| 148 | S | L | -0.7580 | |
| 149 | S | L | -1.2329 | |
| 150 | N | L | 0.0000 | |
| 151 | I | L | 0.0000 | |
| 152 | G | L | -0.9043 | |
| 153 | S | L | -0.7426 | |
| 154 | N | L | 0.0000 | |
| 155 | D | L | -0.3822 | |
| 156 | V | L | 0.0000 | |
| 157 | S | L | 0.0000 | |
| 158 | W | L | 0.0000 | |
| 159 | Y | L | 0.0000 | |
| 160 | Q | L | 0.0000 | |
| 161 | Q | L | 0.0000 | |
| 162 | L | L | -0.6176 | |
| 163 | P | L | -0.4079 | |
| 164 | G | L | -0.6332 | |
| 165 | T | L | -0.6547 | |
| 166 | A | L | -0.6918 | |
| 167 | P | L | 0.0000 | |
| 168 | K | L | -1.3523 | |
| 169 | L | L | 0.0000 | |
| 170 | L | L | 0.0000 | |
| 171 | I | L | 0.0000 | |
| 172 | Y | L | -0.4299 | |
| 173 | K | L | -0.7399 | |
| 174 | N | L | -0.5813 | |
| 175 | Y | L | -0.0522 | |
| 176 | N | L | -0.8434 | |
| 177 | R | L | -1.5528 | |
| 178 | P | L | -1.0059 | |
| 179 | S | L | -0.7147 | |
| 180 | G | L | -0.8868 | |
| 181 | V | L | -1.0770 | |
| 182 | P | L | -1.4092 | |
| 183 | D | L | -2.3411 | |
| 184 | R | L | -1.7579 | |
| 185 | F | L | 0.0000 | |
| 186 | S | L | -0.7876 | |
| 187 | G | L | -0.3385 | |
| 188 | S | L | -0.5144 | |
| 189 | K | L | -0.9328 | |
| 190 | S | L | -0.8519 | |
| 191 | G | L | -0.9344 | |
| 192 | T | L | -0.7779 | |
| 193 | S | L | -0.7402 | |
| 194 | A | L | 0.0000 | |
| 195 | S | L | -0.3728 | |
| 196 | L | L | 0.0000 | |
| 197 | A | L | -0.6802 | |
| 198 | I | L | 0.0000 | |
| 199 | S | L | -1.9176 | |
| 200 | G | L | -1.6619 | |
| 201 | L | L | 0.0000 | |
| 202 | Q | L | -1.4938 | |
| 203 | S | L | -1.4107 | |
| 204 | E | L | -2.2994 | |
| 205 | D | L | 0.0000 | |
| 206 | E | L | -1.8079 | |
| 207 | A | L | 0.0000 | |
| 208 | D | L | -1.2220 | |
| 209 | Y | L | 0.0000 | |
| 210 | Y | L | 0.0000 | |
| 211 | C | L | 0.0000 | |
| 212 | S | L | 0.0000 | |
| 213 | A | L | 0.0000 | |
| 214 | W | L | 0.0000 | |
| 215 | D | L | 0.0000 | |
| 216 | Q | L | -1.7412 | |
| 217 | R | L | -2.3237 | |
| 218 | Q | L | -1.3470 | |
| 219 | F | L | 0.6832 | |
| 220 | D | L | -0.1802 | |
| 221 | V | L | 0.0000 | |
| 222 | V | L | 0.2687 | |
| 223 | F | L | 0.0000 | |
| 224 | G | L | 0.0000 | |
| 225 | G | L | -1.0372 | |
| 226 | G | L | -1.1592 | |
| 227 | T | L | 0.0000 | |
| 228 | K | L | -2.1733 | |
| 229 | L | L | 0.0000 | |
| 230 | T | L | -0.7158 | |
| 231 | V | L | -0.2249 | |
| 232 | L | L | 1.3405 |