| Chain sequence(s) |
A: MIPGGLSEAKPATPEIQEIVDKVKPQLEEKTNETYGKLEAVQYKTQVVAGTNYYIKVRAGDNKYMHLKVFKSLPGQNEDLVLTGYQVDKKDDELTGF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:02)
[INFO] Main: Simulation completed successfully. (00:03:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.6588 | |
| 2 | I | A | 2.2388 | |
| 3 | P | A | 1.0924 | |
| 4 | G | A | 0.6778 | |
| 5 | G | A | 0.5751 | |
| 6 | L | A | 0.1259 | |
| 7 | S | A | -0.4924 | |
| 8 | E | A | -1.9593 | |
| 9 | A | A | -1.7993 | |
| 10 | K | A | -1.5776 | |
| 11 | P | A | -0.7799 | |
| 12 | A | A | -0.9344 | |
| 13 | T | A | -1.2403 | |
| 14 | P | A | -1.7456 | |
| 15 | E | A | -2.8619 | |
| 16 | I | A | 0.0000 | |
| 17 | Q | A | -2.7568 | |
| 18 | E | A | -3.9349 | |
| 19 | I | A | 0.0000 | |
| 20 | V | A | 0.0000 | |
| 21 | D | A | -4.1822 | |
| 22 | K | A | -3.3560 | |
| 23 | V | A | 0.0000 | |
| 24 | K | A | -2.7419 | |
| 25 | P | A | -2.1958 | |
| 26 | Q | A | -2.1093 | |
| 27 | L | A | 0.0000 | |
| 28 | E | A | -3.0107 | |
| 29 | E | A | -3.7237 | |
| 30 | K | A | -3.2329 | |
| 31 | T | A | -2.6007 | |
| 32 | N | A | -3.3402 | |
| 33 | E | A | -3.1877 | |
| 34 | T | A | -1.8814 | |
| 35 | Y | A | -1.3399 | |
| 36 | G | A | -1.6572 | |
| 37 | K | A | -2.7175 | |
| 38 | L | A | 0.0000 | |
| 39 | E | A | -2.3349 | |
| 40 | A | A | -1.5999 | |
| 41 | V | A | -0.3378 | |
| 42 | Q | A | -1.0968 | |
| 43 | Y | A | 0.0000 | |
| 44 | K | A | -1.1057 | |
| 45 | T | A | -0.0835 | |
| 46 | Q | A | 0.6080 | |
| 47 | V | A | 1.9798 | |
| 48 | V | A | 1.7416 | |
| 49 | A | A | 1.0843 | |
| 50 | G | A | 0.0000 | |
| 51 | T | A | 0.9904 | |
| 52 | N | A | 0.5057 | |
| 53 | Y | A | 0.0841 | |
| 54 | Y | A | 0.0000 | |
| 55 | I | A | 0.0000 | |
| 56 | K | A | -1.0238 | |
| 57 | V | A | 0.0000 | |
| 58 | R | A | -2.5305 | |
| 59 | A | A | -1.9756 | |
| 60 | G | A | -2.5300 | |
| 61 | D | A | -2.9233 | |
| 62 | N | A | -3.2982 | |
| 63 | K | A | -2.8903 | |
| 64 | Y | A | -2.5995 | |
| 65 | M | A | 0.0000 | |
| 66 | H | A | 0.0000 | |
| 67 | L | A | 0.0000 | |
| 68 | K | A | 0.0256 | |
| 69 | V | A | 0.0000 | |
| 70 | F | A | 0.2393 | |
| 71 | K | A | -0.8889 | |
| 72 | S | A | -1.1772 | |
| 73 | L | A | -0.2758 | |
| 74 | P | A | -1.2368 | |
| 75 | G | A | -1.5583 | |
| 76 | Q | A | -2.6792 | |
| 77 | N | A | -3.2163 | |
| 78 | E | A | -3.4286 | |
| 79 | D | A | -2.8962 | |
| 80 | L | A | -1.2587 | |
| 81 | V | A | -0.1556 | |
| 82 | L | A | 0.0000 | |
| 83 | T | A | 0.3669 | |
| 84 | G | A | 0.1737 | |
| 85 | Y | A | 0.4856 | |
| 86 | Q | A | 0.1435 | |
| 87 | V | A | -0.0260 | |
| 88 | D | A | -2.5065 | |
| 89 | K | A | -3.0410 | |
| 90 | K | A | -3.6665 | |
| 91 | D | A | -3.7403 | |
| 92 | D | A | -3.8589 | |
| 93 | E | A | -3.2689 | |
| 94 | L | A | 0.0000 | |
| 95 | T | A | -0.6880 | |
| 96 | G | A | -0.1421 | |
| 97 | F | A | 0.8543 |