| Chain sequence(s) |
A: MGGSMEFIPTQTFYNRRYQPRPWTPRPTIEAAAKHSCHSPVALERIRNEATDGTEAAAKRIRNEATDGTLKIQVSLQIGEAAAKADAERAGLFVRTSAPCTITGEAAAKPKGETLTVGFTDSRKISHSCEAAAKTVRYKCNCGGSNEGLTTTDKEAAAKHPTLLSYRNMGEEPNYQEEWVMHKKEAAAKPTEGLEVTWGNNEPYKYWPQLSTNGTEAAAKAEEEREAELTREALPPLQEAAAKIQMRTQVELLDEHISIDCRSHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:46)
[INFO] Main: Simulation completed successfully. (00:06:48)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.6755 | |
| 2 | G | A | -0.3053 | |
| 3 | G | A | -0.6536 | |
| 4 | S | A | -0.6766 | |
| 5 | M | A | 0.2830 | |
| 6 | E | A | -0.2175 | |
| 7 | F | A | 1.7512 | |
| 8 | I | A | 1.1691 | |
| 9 | P | A | 0.5496 | |
| 10 | T | A | -0.2598 | |
| 11 | Q | A | -0.6426 | |
| 12 | T | A | -1.0382 | |
| 13 | F | A | 0.0000 | |
| 14 | Y | A | -1.1524 | |
| 15 | N | A | 0.0000 | |
| 16 | R | A | -3.0311 | |
| 17 | R | A | -2.7874 | |
| 18 | Y | A | -1.3935 | |
| 19 | Q | A | -2.1612 | |
| 20 | P | A | -1.7167 | |
| 21 | R | A | -2.5329 | |
| 22 | P | A | -1.5132 | |
| 23 | W | A | -0.6241 | |
| 24 | T | A | -0.7431 | |
| 25 | P | A | -0.5723 | |
| 26 | R | A | -1.5003 | |
| 27 | P | A | -1.3058 | |
| 28 | T | A | -0.8941 | |
| 29 | I | A | -1.2203 | |
| 30 | E | A | -2.3145 | |
| 31 | A | A | -1.5849 | |
| 32 | A | A | -1.0789 | |
| 33 | A | A | -1.2602 | |
| 34 | K | A | -2.5384 | |
| 35 | H | A | -1.8664 | |
| 36 | S | A | -1.3530 | |
| 37 | C | A | -0.5524 | |
| 38 | H | A | -0.9582 | |
| 39 | S | A | -0.7138 | |
| 40 | P | A | -0.7206 | |
| 41 | V | A | 0.0000 | |
| 42 | A | A | 0.0000 | |
| 43 | L | A | 0.0000 | |
| 44 | E | A | -1.9014 | |
| 45 | R | A | -2.6007 | |
| 46 | I | A | -1.9587 | |
| 47 | R | A | -3.1329 | |
| 48 | N | A | -2.7471 | |
| 49 | E | A | -2.3354 | |
| 50 | A | A | -1.6182 | |
| 51 | T | A | -1.5822 | |
| 52 | D | A | -2.0972 | |
| 53 | G | A | -1.2870 | |
| 54 | T | A | -1.6404 | |
| 55 | E | A | -2.7595 | |
| 56 | A | A | -2.2638 | |
| 57 | A | A | -2.4243 | |
| 58 | A | A | -3.1258 | |
| 59 | K | A | -4.2137 | |
| 60 | R | A | -4.2519 | |
| 61 | I | A | -3.2692 | |
| 62 | R | A | -4.2475 | |
| 63 | N | A | -4.1542 | |
| 64 | E | A | -4.0490 | |
| 65 | A | A | -3.0041 | |
| 66 | T | A | -2.2395 | |
| 67 | D | A | -2.7758 | |
| 68 | G | A | -1.9999 | |
| 69 | T | A | -1.5901 | |
| 70 | L | A | -1.4966 | |
| 71 | K | A | -2.1520 | |
| 72 | I | A | 0.0000 | |
| 73 | Q | A | -2.1834 | |
| 74 | V | A | 0.0000 | |
| 75 | S | A | -1.6491 | |
| 76 | L | A | -0.8255 | |
| 77 | Q | A | -1.2664 | |
| 78 | I | A | -0.4517 | |
| 79 | G | A | -1.5031 | |
| 80 | E | A | -2.4819 | |
| 81 | A | A | -1.4882 | |
| 82 | A | A | 0.0000 | |
| 83 | A | A | -2.0127 | |
| 84 | K | A | -2.6031 | |
| 85 | A | A | -2.4529 | |
| 86 | D | A | -3.3400 | |
| 87 | A | A | -2.8340 | |
| 88 | E | A | -3.2524 | |
| 89 | R | A | -2.8316 | |
| 90 | A | A | -1.3701 | |
| 91 | G | A | -1.4474 | |
| 92 | L | A | -0.5480 | |
| 93 | F | A | -0.1555 | |
| 94 | V | A | 0.0000 | |
| 95 | R | A | -1.8252 | |
| 96 | T | A | -1.9033 | |
| 97 | S | A | -1.4895 | |
| 98 | A | A | -1.7623 | |
| 99 | P | A | -1.6267 | |
| 100 | C | A | -1.1140 | |
| 101 | T | A | -0.3847 | |
| 102 | I | A | 0.3620 | |
| 103 | T | A | -0.4881 | |
| 104 | G | A | -1.4916 | |
| 105 | E | A | -2.3495 | |
| 106 | A | A | -1.3963 | |
| 107 | A | A | 0.0000 | |
| 108 | A | A | 0.0000 | |
| 109 | K | A | -2.1293 | |
| 110 | P | A | -2.4001 | |
| 111 | K | A | -2.7221 | |
| 112 | G | A | -2.3116 | |
| 113 | E | A | -2.5993 | |
| 114 | T | A | -1.8151 | |
| 115 | L | A | 0.0000 | |
| 116 | T | A | -0.9218 | |
| 117 | V | A | 0.0000 | |
| 118 | G | A | 0.0000 | |
| 119 | F | A | 0.0000 | |
| 120 | T | A | -1.3856 | |
| 121 | D | A | 0.0000 | |
| 122 | S | A | -2.4441 | |
| 123 | R | A | -2.6323 | |
| 124 | K | A | -2.2289 | |
| 125 | I | A | -0.5664 | |
| 126 | S | A | -0.4975 | |
| 127 | H | A | -0.2131 | |
| 128 | S | A | -0.3507 | |
| 129 | C | A | 0.0000 | |
| 130 | E | A | -1.2268 | |
| 131 | A | A | -1.0081 | |
| 132 | A | A | -1.2911 | |
| 133 | A | A | -1.2690 | |
| 134 | K | A | -1.7007 | |
| 135 | T | A | -0.8099 | |
| 136 | V | A | 0.3653 | |
| 137 | R | A | -0.9077 | |
| 138 | Y | A | 0.0214 | |
| 139 | K | A | -1.2142 | |
| 140 | C | A | -0.4106 | |
| 141 | N | A | -1.0199 | |
| 142 | C | A | -0.2425 | |
| 143 | G | A | -0.7753 | |
| 144 | G | A | -1.2422 | |
| 145 | S | A | -1.6136 | |
| 146 | N | A | -2.3526 | |
| 147 | E | A | -2.3385 | |
| 148 | G | A | -0.9983 | |
| 149 | L | A | 0.6019 | |
| 150 | T | A | 0.0578 | |
| 151 | T | A | -0.5093 | |
| 152 | T | A | -1.5977 | |
| 153 | D | A | -3.1988 | |
| 154 | K | A | -3.4368 | |
| 155 | E | A | -3.3937 | |
| 156 | A | A | -2.3279 | |
| 157 | A | A | -2.4281 | |
| 158 | A | A | -2.5259 | |
| 159 | K | A | -2.9053 | |
| 160 | H | A | -1.8994 | |
| 161 | P | A | -0.9364 | |
| 162 | T | A | -0.7080 | |
| 163 | L | A | -0.2253 | |
| 164 | L | A | 0.0000 | |
| 165 | S | A | 0.0000 | |
| 166 | Y | A | -1.2315 | |
| 167 | R | A | -1.9019 | |
| 168 | N | A | -2.1050 | |
| 169 | M | A | -1.3772 | |
| 170 | G | A | -2.2820 | |
| 171 | E | A | -3.0187 | |
| 172 | E | A | -3.2515 | |
| 173 | P | A | -2.2906 | |
| 174 | N | A | -2.0039 | |
| 175 | Y | A | -0.7120 | |
| 176 | Q | A | -1.7386 | |
| 177 | E | A | -2.3384 | |
| 178 | E | A | -1.7930 | |
| 179 | W | A | 0.1612 | |
| 180 | V | A | 0.0000 | |
| 181 | M | A | -0.0479 | |
| 182 | H | A | -1.1846 | |
| 183 | K | A | -1.6712 | |
| 184 | K | A | -1.9186 | |
| 185 | E | A | -2.2063 | |
| 186 | A | A | 0.0000 | |
| 187 | A | A | -0.6237 | |
| 188 | A | A | 0.0000 | |
| 189 | K | A | -1.5155 | |
| 190 | P | A | -0.3754 | |
| 191 | T | A | -0.6425 | |
| 192 | E | A | -1.5488 | |
| 193 | G | A | 0.0000 | |
| 194 | L | A | 0.0000 | |
| 195 | E | A | -0.8070 | |
| 196 | V | A | 0.0000 | |
| 197 | T | A | -1.4471 | |
| 198 | W | A | -0.8136 | |
| 199 | G | A | -1.1505 | |
| 200 | N | A | -2.2345 | |
| 201 | N | A | -2.6326 | |
| 202 | E | A | -2.8392 | |
| 203 | P | A | -1.7350 | |
| 204 | Y | A | -1.1365 | |
| 205 | K | A | -1.5146 | |
| 206 | Y | A | -0.1882 | |
| 207 | W | A | 0.5726 | |
| 208 | P | A | 0.7101 | |
| 209 | Q | A | 0.2800 | |
| 210 | L | A | 1.1680 | |
| 211 | S | A | -0.2877 | |
| 212 | T | A | -0.9107 | |
| 213 | N | A | -1.7536 | |
| 214 | G | A | -1.6936 | |
| 215 | T | A | -1.6255 | |
| 216 | E | A | -2.2382 | |
| 217 | A | A | -1.5785 | |
| 218 | A | A | -1.7702 | |
| 219 | A | A | -2.7013 | |
| 220 | K | A | -4.2104 | |
| 221 | A | A | -3.8101 | |
| 222 | E | A | -5.0748 | |
| 223 | E | A | -5.5987 | |
| 224 | E | A | -5.4100 | |
| 225 | R | A | -5.4639 | |
| 226 | E | A | -4.8474 | |
| 227 | A | A | -3.9466 | |
| 228 | E | A | -4.2848 | |
| 229 | L | A | -1.6621 | |
| 230 | T | A | -1.6789 | |
| 231 | R | A | -2.9168 | |
| 232 | E | A | -2.3080 | |
| 233 | A | A | -0.4358 | |
| 234 | L | A | 0.6918 | |
| 235 | P | A | -0.4452 | |
| 236 | P | A | -0.3473 | |
| 237 | L | A | 0.6975 | |
| 238 | Q | A | -1.3393 | |
| 239 | E | A | -2.2345 | |
| 240 | A | A | -1.1807 | |
| 241 | A | A | -0.8517 | |
| 242 | A | A | -1.2184 | |
| 243 | K | A | -2.0360 | |
| 244 | I | A | -0.7633 | |
| 245 | Q | A | -1.2894 | |
| 246 | M | A | -0.6825 | |
| 247 | R | A | -1.7180 | |
| 248 | T | A | -1.1325 | |
| 249 | Q | A | -1.1056 | |
| 250 | V | A | 0.7015 | |
| 251 | E | A | -0.3389 | |
| 252 | L | A | 1.0152 | |
| 253 | L | A | 0.5188 | |
| 254 | D | A | -1.6976 | |
| 255 | E | A | -2.0612 | |
| 256 | H | A | -2.3981 | |
| 257 | I | A | -1.4265 | |
| 258 | S | A | 0.0000 | |
| 259 | I | A | 0.0000 | |
| 260 | D | A | -1.0371 | |
| 261 | C | A | 0.0000 | |
| 262 | R | A | -2.7985 | |
| 263 | S | A | -2.5078 | |
| 264 | H | A | -2.5610 | |
| 265 | H | A | -2.7144 | |
| 266 | H | A | -2.7189 | |
| 267 | H | A | -2.6911 | |
| 268 | H | A | -2.4018 | |
| 269 | H | A | -1.9044 |