| Chain sequence(s) |
A: MEAGRPRPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVQSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQRMGD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:23)
[INFO] Main: Simulation completed successfully. (00:03:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.1335 | |
| 2 | E | A | -1.7389 | |
| 3 | A | A | -1.2553 | |
| 4 | G | A | -2.1059 | |
| 5 | R | A | -2.9697 | |
| 6 | P | A | -2.0290 | |
| 7 | R | A | -2.5977 | |
| 8 | P | A | -1.5231 | |
| 9 | V | A | -0.0579 | |
| 10 | L | A | -0.4834 | |
| 11 | R | A | -0.6732 | |
| 12 | S | A | 0.0000 | |
| 13 | V | A | 0.6819 | |
| 14 | N | A | -1.2877 | |
| 15 | S | A | -1.8815 | |
| 16 | R | A | -2.9241 | |
| 17 | E | A | -2.9314 | |
| 18 | P | A | -2.1273 | |
| 19 | S | A | 0.0000 | |
| 20 | Q | A | -1.8318 | |
| 21 | V | A | 0.0000 | |
| 22 | I | A | -0.7839 | |
| 23 | F | A | 0.0000 | |
| 24 | C | A | -1.1308 | |
| 25 | N | A | 0.0000 | |
| 26 | R | A | -2.1798 | |
| 27 | S | A | 0.0000 | |
| 28 | P | A | -0.9727 | |
| 29 | R | A | -0.9208 | |
| 30 | V | A | -0.0363 | |
| 31 | V | A | 0.0000 | |
| 32 | L | A | 0.1481 | |
| 33 | P | A | 0.0000 | |
| 34 | V | A | 0.0000 | |
| 35 | W | A | -0.3653 | |
| 36 | L | A | 0.0000 | |
| 37 | N | A | -1.1203 | |
| 38 | F | A | -0.7984 | |
| 39 | D | A | -2.3664 | |
| 40 | G | A | -1.7694 | |
| 41 | E | A | -2.7155 | |
| 42 | P | A | -1.5948 | |
| 43 | Q | A | -1.1059 | |
| 44 | P | A | -0.4934 | |
| 45 | Y | A | 0.1528 | |
| 46 | P | A | -0.1567 | |
| 47 | T | A | 0.0505 | |
| 48 | L | A | 0.0000 | |
| 49 | P | A | -0.6451 | |
| 50 | P | A | -1.0358 | |
| 51 | G | A | -1.3022 | |
| 52 | T | A | -1.0032 | |
| 53 | G | A | -1.5536 | |
| 54 | R | A | -1.9818 | |
| 55 | R | A | -2.4726 | |
| 56 | I | A | -1.6131 | |
| 57 | H | A | -1.6678 | |
| 58 | S | A | 0.0000 | |
| 59 | Y | A | -1.5753 | |
| 60 | R | A | -1.9001 | |
| 61 | G | A | -0.2540 | |
| 62 | H | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | W | A | 0.0000 | |
| 65 | L | A | 0.0000 | |
| 66 | F | A | 0.0000 | |
| 67 | R | A | 0.0000 | |
| 68 | D | A | 0.0000 | |
| 69 | A | A | -0.2128 | |
| 70 | G | A | -0.5029 | |
| 71 | T | A | -0.7586 | |
| 72 | H | A | -0.7506 | |
| 73 | D | A | -0.6677 | |
| 74 | G | A | -0.5772 | |
| 75 | L | A | 0.0000 | |
| 76 | L | A | -0.6414 | |
| 77 | V | A | 0.0000 | |
| 78 | N | A | -1.4370 | |
| 79 | Q | A | -1.7845 | |
| 80 | T | A | -1.4575 | |
| 81 | E | A | -1.6940 | |
| 82 | L | A | -0.3326 | |
| 83 | F | A | 0.0000 | |
| 84 | V | A | 1.5903 | |
| 85 | P | A | 0.0000 | |
| 86 | S | A | -0.0896 | |
| 87 | L | A | -0.3439 | |
| 88 | N | A | -0.7484 | |
| 89 | V | A | 0.4116 | |
| 90 | D | A | -1.5395 | |
| 91 | G | A | -1.5064 | |
| 92 | Q | A | -1.4944 | |
| 93 | P | A | -0.8452 | |
| 94 | I | A | 0.2780 | |
| 95 | F | A | 0.4392 | |
| 96 | A | A | 0.0000 | |
| 97 | N | A | -0.8653 | |
| 98 | I | A | 0.0000 | |
| 99 | T | A | -0.7127 | |
| 100 | L | A | 0.3237 | |
| 101 | P | A | 0.8041 | |
| 102 | V | A | 1.8652 | |
| 103 | Y | A | 0.5759 | |
| 104 | T | A | 0.1295 | |
| 105 | L | A | 0.4854 | |
| 106 | K | A | -1.2013 | |
| 107 | E | A | -1.4217 | |
| 108 | R | A | -1.2419 | |
| 109 | C | A | -0.2979 | |
| 110 | L | A | -0.6996 | |
| 111 | Q | A | -0.3519 | |
| 112 | V | A | 0.7091 | |
| 113 | V | A | 0.7915 | |
| 114 | Q | A | -0.3254 | |
| 115 | S | A | 0.5456 | |
| 116 | L | A | 1.4070 | |
| 117 | V | A | -0.1019 | |
| 118 | K | A | -2.0536 | |
| 119 | P | A | -2.3962 | |
| 120 | E | A | -3.3993 | |
| 121 | N | A | -2.9448 | |
| 122 | Y | A | 0.0000 | |
| 123 | R | A | -3.9638 | |
| 124 | R | A | -3.3465 | |
| 125 | L | A | -1.8092 | |
| 126 | D | A | -1.9829 | |
| 127 | I | A | -0.2314 | |
| 128 | V | A | 0.9030 | |
| 129 | R | A | -1.6730 | |
| 130 | S | A | -0.8606 | |
| 131 | L | A | -1.0725 | |
| 132 | Y | A | 0.0000 | |
| 133 | E | A | -3.4861 | |
| 134 | D | A | -2.8336 | |
| 135 | L | A | 0.0000 | |
| 136 | E | A | -3.4927 | |
| 137 | D | A | -3.5186 | |
| 138 | H | A | -2.7647 | |
| 139 | P | A | -1.9579 | |
| 140 | N | A | -2.2327 | |
| 141 | V | A | -1.8861 | |
| 142 | Q | A | -2.9158 | |
| 143 | K | A | -3.1926 | |
| 144 | D | A | -2.9003 | |
| 145 | L | A | 0.0000 | |
| 146 | E | A | -3.9546 | |
| 147 | R | A | -4.2108 | |
| 148 | L | A | -2.9473 | |
| 149 | T | A | -2.4994 | |
| 150 | Q | A | -3.3543 | |
| 151 | E | A | -3.9755 | |
| 152 | R | A | -3.4703 | |
| 153 | I | A | -1.8655 | |
| 154 | A | A | -2.3475 | |
| 155 | H | A | -3.1018 | |
| 156 | Q | A | -3.2246 | |
| 157 | R | A | -2.9564 | |
| 158 | M | A | -1.2422 | |
| 159 | G | A | -2.0463 | |
| 160 | D | A | -2.6452 |