| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKDGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTIGHPLFNKLGDTENPTAYVHDGADVRVPFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPEGVPLPDLPPPSPLYVRPPPWSPFAVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEDNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9507 | |
| 2 | L | A | 1.9756 | |
| 3 | P | A | 0.6558 | |
| 4 | P | A | 0.3425 | |
| 5 | T | A | 0.1061 | |
| 6 | T | A | 0.1268 | |
| 7 | P | A | 0.1649 | |
| 8 | V | A | 1.2196 | |
| 9 | A | A | 0.0268 | |
| 10 | K | A | -1.1638 | |
| 11 | V | A | -0.4159 | |
| 12 | Q | A | -1.5455 | |
| 13 | S | A | -1.6165 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4304 | |
| 16 | E | A | -2.4454 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4534 | |
| 20 | P | A | 0.1035 | |
| 21 | T | A | 0.1148 | |
| 22 | S | A | -0.1710 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1016 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2783 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8747 | |
| 31 | R | A | -2.6488 | |
| 32 | L | A | -0.7818 | |
| 33 | L | A | 1.2189 | |
| 34 | T | A | 1.4758 | |
| 35 | V | A | 2.0360 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2106 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6212 | |
| 40 | K | A | -1.6256 | |
| 41 | D | A | -0.9048 | |
| 42 | I | A | 0.8287 | |
| 43 | V | A | 0.8992 | |
| 44 | K | A | -1.4270 | |
| 45 | D | A | -2.4412 | |
| 46 | G | A | -1.4846 | |
| 47 | K | A | -1.0958 | |
| 48 | V | A | 1.4236 | |
| 49 | V | A | 2.0006 | |
| 50 | V | A | 1.3218 | |
| 51 | P | A | 0.5057 | |
| 52 | K | A | -0.6086 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1473 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4765 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3053 | |
| 70 | K | A | -1.8196 | |
| 71 | F | A | -0.6747 | |
| 72 | A | A | -0.5775 | |
| 73 | L | A | -0.8626 | |
| 74 | P | A | -1.2568 | |
| 75 | Q | A | -2.4660 | |
| 76 | K | A | -3.0889 | |
| 77 | D | A | -2.9888 | |
| 78 | F | A | -1.6323 | |
| 79 | Y | A | -1.9227 | |
| 80 | D | A | -2.7680 | |
| 81 | P | A | -2.3607 | |
| 82 | E | A | -3.0729 | |
| 83 | K | A | -3.4395 | |
| 84 | E | A | -2.4993 | |
| 85 | R | A | -1.3118 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6407 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9576 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3639 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6849 | |
| 99 | G | A | -0.5550 | |
| 100 | P | A | -0.4310 | |
| 101 | L | A | -0.0096 | |
| 102 | G | A | -0.2040 | |
| 103 | K | A | -0.5695 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4175 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | 0.0904 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.2583 | |
| 110 | L | A | 0.2575 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0713 | |
| 113 | K | A | -0.6012 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -0.7492 | |
| 116 | D | A | -1.3601 | |
| 117 | T | A | -1.1278 | |
| 118 | E | A | -2.5671 | |
| 119 | N | A | -2.3577 | |
| 120 | P | A | -1.3938 | |
| 121 | T | A | -0.6627 | |
| 122 | A | A | -0.0263 | |
| 123 | Y | A | 0.6496 | |
| 124 | V | A | -0.0475 | |
| 125 | H | A | -1.1078 | |
| 126 | D | A | -2.2113 | |
| 127 | G | A | -1.9325 | |
| 128 | A | A | -1.4061 | |
| 129 | D | A | -2.1689 | |
| 130 | V | A | -1.3744 | |
| 131 | R | A | -0.9240 | |
| 132 | V | A | 0.1148 | |
| 133 | P | A | 0.0733 | |
| 134 | F | A | 0.0855 | |
| 135 | S | A | -0.1527 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6630 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.1998 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5518 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2442 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1026 | |
| 157 | D | A | 0.3434 | |
| 158 | I | A | 0.8432 | |
| 159 | A | A | 0.1131 | |
| 160 | E | A | -1.4763 | |
| 161 | P | A | -0.2412 | |
| 162 | C | A | 0.1786 | |
| 163 | P | A | -0.1693 | |
| 164 | G | A | -0.0700 | |
| 165 | L | A | 0.6018 | |
| 166 | P | A | -0.1045 | |
| 167 | P | A | -0.3356 | |
| 168 | G | A | -0.4181 | |
| 169 | A | A | 0.2935 | |
| 170 | C | A | 1.0981 | |
| 171 | P | A | 0.5562 | |
| 172 | P | A | 0.7888 | |
| 173 | I | A | 2.0445 | |
| 174 | Q | A | 0.8585 | |
| 175 | L | A | 1.4415 | |
| 176 | V | A | 0.8224 | |
| 177 | N | A | -0.3117 | |
| 178 | S | A | 0.0136 | |
| 179 | V | A | 0.4190 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3761 | |
| 182 | D | A | 0.0781 | |
| 183 | G | A | -0.1560 | |
| 184 | D | A | -0.5705 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1323 | |
| 190 | F | A | 0.0492 | |
| 191 | G | A | -0.1132 | |
| 192 | N | A | -0.2964 | |
| 193 | M | A | -0.1725 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4157 | |
| 197 | E | A | -2.6255 | |
| 198 | L | A | -1.2132 | |
| 199 | Q | A | -2.5277 | |
| 200 | Q | A | -3.3346 | |
| 201 | D | A | -3.5850 | |
| 202 | R | A | -3.3393 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1941 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3940 | |
| 211 | S | A | -1.9145 | |
| 212 | T | A | -1.5021 | |
| 213 | R | A | -2.2009 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1762 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3108 | |
| 220 | L | A | 0.5259 | |
| 221 | K | A | -1.2577 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9502 | |
| 224 | N | A | -1.6809 | |
| 225 | E | A | -1.3165 | |
| 226 | A | A | -0.6855 | |
| 227 | Y | A | -0.4598 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7010 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1455 | |
| 234 | F | A | 0.0273 | |
| 235 | G | A | -0.9352 | |
| 236 | R | A | -2.6949 | |
| 237 | R | A | -2.9883 | |
| 238 | E | A | -2.1722 | |
| 239 | Q | A | -0.2048 | |
| 240 | V | A | 1.4996 | |
| 241 | Y | A | 1.2080 | |
| 242 | A | A | 0.1750 | |
| 243 | R | A | -1.2765 | |
| 244 | H | A | -1.1727 | |
| 245 | F | A | -0.1967 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.7560 | |
| 249 | A | A | -1.3479 | |
| 250 | G | A | -1.1601 | |
| 251 | P | A | -0.7443 | |
| 252 | E | A | -0.3554 | |
| 253 | G | A | 0.0869 | |
| 254 | V | A | 1.3279 | |
| 255 | P | A | 0.0347 | |
| 256 | L | A | 0.3451 | |
| 257 | P | A | -0.2466 | |
| 258 | D | A | -1.7169 | |
| 259 | L | A | -0.4068 | |
| 260 | P | A | -0.7361 | |
| 261 | P | A | -0.4761 | |
| 262 | P | A | -0.1158 | |
| 263 | S | A | 0.1205 | |
| 264 | P | A | 0.7835 | |
| 265 | L | A | 1.5441 | |
| 266 | Y | A | 1.1367 | |
| 267 | V | A | 1.1237 | |
| 268 | R | A | -0.9331 | |
| 269 | P | A | 0.2117 | |
| 270 | P | A | 0.1467 | |
| 271 | P | A | 0.4898 | |
| 272 | W | A | 1.4424 | |
| 273 | S | A | 0.0000 | |
| 274 | P | A | 1.1870 | |
| 275 | F | A | 2.0871 | |
| 276 | A | A | 1.3349 | |
| 277 | V | A | 1.7910 | |
| 278 | R | A | 0.3394 | |
| 279 | P | A | -0.1757 | |
| 280 | P | A | -0.5230 | |
| 281 | T | A | -0.1875 | |
| 282 | D | A | -0.5819 | |
| 283 | Y | A | 0.8773 | |
| 284 | F | A | 0.7025 | |
| 285 | G | A | 0.1430 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9150 | |
| 291 | L | A | 1.6323 | |
| 292 | V | A | 0.6459 | |
| 293 | S | A | -0.1703 | |
| 294 | S | A | -0.9786 | |
| 295 | D | A | -1.8426 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1508 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6325 | |
| 301 | R | A | -1.8660 | |
| 302 | P | A | -0.9527 | |
| 303 | F | A | -0.1726 | |
| 304 | W | A | -0.5087 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0807 | |
| 307 | R | A | -2.9270 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7845 | |
| 310 | G | A | -1.4273 | |
| 311 | N | A | -1.4037 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8945 | |
| 319 | N | A | -0.9916 | |
| 320 | E | A | -1.0516 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3345 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1221 | |
| 333 | N | A | 0.4363 | |
| 334 | F | A | 1.4485 | |
| 335 | T | A | 0.7234 | |
| 336 | I | A | 0.3794 | |
| 337 | S | A | -0.9802 | |
| 338 | Q | A | -1.7205 | |
| 339 | Q | A | -1.2751 | |
| 340 | L | A | 0.6863 | |
| 341 | C | A | 0.3240 | |
| 342 | T | A | -0.3407 | |
| 343 | P | A | -0.9875 | |
| 344 | E | A | -2.5112 | |
| 345 | D | A | -2.5700 | |
| 346 | N | A | -1.6281 | |
| 347 | V | A | 0.4953 | |
| 348 | Y | A | 0.9691 | |
| 349 | D | A | -0.1035 | |
| 350 | P | A | -0.3558 | |
| 351 | S | A | -0.2846 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7154 | |
| 354 | K | A | -1.7568 | |
| 355 | N | A | -1.7562 | |
| 356 | Y | A | -0.1122 | |
| 357 | L | A | 0.5597 | |
| 358 | R | A | 0.9077 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4754 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0034 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9350 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6638 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3071 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3180 | |
| 376 | L | A | -1.7452 | |
| 377 | D | A | -2.0196 | |
| 378 | P | A | -1.0561 | |
| 379 | G | A | -1.0135 | |
| 380 | V | A | -0.9223 | |
| 381 | L | A | -0.5332 | |
| 382 | A | A | -0.6557 | |
| 383 | H | A | -0.8467 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3965 | |
| 386 | T | A | -0.5762 | |
| 387 | M | A | -0.3342 | |
| 388 | N | A | -0.8698 | |
| 389 | P | A | -1.2634 | |
| 390 | T | A | -1.5163 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5146 | |
| 393 | E | A | -2.9034 | |
| 394 | N | A | -2.6327 | |
| 395 | W | A | -1.5081 | |
| 396 | N | A | -1.3853 | |
| 397 | L | A | -0.2550 | |
| 398 | G | A | 0.5260 | |
| 399 | F | A | 2.4107 | |
| 400 | V | A | 1.8437 | |
| 401 | P | A | 0.0542 | |
| 402 | P | A | -1.8588 | |
| 403 | K | A | -3.5054 | |
| 404 | E | A | -3.8569 | |
| 405 | R | A | -4.1224 | |
| 406 | E | A | -3.8604 | |
| 407 | D | A | -2.9092 | |
| 408 | P | A | -1.7833 | |
| 409 | Y | A | -0.9912 | |
| 410 | K | A | -2.0985 | |
| 411 | G | A | -0.6400 | |
| 412 | L | A | 0.6628 | |
| 413 | I | A | 1.5822 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3950 | |
| 416 | E | A | -1.6705 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9400 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0768 | |
| 421 | E | A | -2.7950 | |
| 422 | R | A | -2.5910 | |
| 423 | F | A | -1.3064 | |
| 424 | S | A | -1.4667 | |
| 425 | Q | A | -1.7844 | |
| 426 | D | A | -2.9001 | |
| 427 | L | A | -2.0041 | |
| 428 | D | A | -2.8053 | |
| 429 | Q | A | -2.6235 | |
| 430 | F | A | -1.4414 | |
| 431 | A | A | -0.9006 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5798 | |
| 435 | K | A | -0.7218 | |
| 436 | F | A | 0.1524 | |
| 437 | L | A | 1.0295 | |
| 438 | Y | A | 0.8258 | |
| 439 | Q | A | -0.2648 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine