| Chain sequence(s) |
A: MLPAPKNLVVSRITEDSARLSWTAPDAAFDSFTIKYIERATWGEAIWLNVPGSERSYDLTGLKPGTEYVVLINGVKGGPESWPLIAHFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:48)
[INFO] Main: Simulation completed successfully. (00:00:48)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9826 | |
| 2 | L | A | 0.2487 | |
| 3 | P | A | -0.1390 | |
| 4 | A | A | -0.2713 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -2.0098 | |
| 7 | N | A | -1.1162 | |
| 8 | L | A | 0.2536 | |
| 9 | V | A | 1.1505 | |
| 10 | V | A | 0.1991 | |
| 11 | S | A | -0.5710 | |
| 12 | R | A | -1.9348 | |
| 13 | I | A | -0.8504 | |
| 14 | T | A | -1.6653 | |
| 15 | E | A | -2.9768 | |
| 16 | D | A | -2.6797 | |
| 17 | S | A | -2.0159 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.1917 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3557 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.2809 | |
| 24 | A | A | -1.4147 | |
| 25 | P | A | -1.4119 | |
| 26 | D | A | -2.2587 | |
| 27 | A | A | -1.4575 | |
| 28 | A | A | -1.2144 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.6026 | |
| 31 | S | A | -1.9496 | |
| 32 | F | A | 0.0000 | |
| 33 | T | A | -0.5343 | |
| 34 | I | A | 0.0000 | |
| 35 | K | A | 0.5919 | |
| 36 | Y | A | 0.3128 | |
| 37 | I | A | 0.0000 | |
| 38 | E | A | -1.4415 | |
| 39 | R | A | -1.4559 | |
| 40 | A | A | -0.5857 | |
| 41 | T | A | -0.4029 | |
| 42 | W | A | 0.0650 | |
| 43 | G | A | -0.7871 | |
| 44 | E | A | -1.3877 | |
| 45 | A | A | -0.1567 | |
| 46 | I | A | 0.8228 | |
| 47 | W | A | 1.1154 | |
| 48 | L | A | 0.3633 | |
| 49 | N | A | -0.9985 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.3774 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.5705 | |
| 54 | E | A | -1.6349 | |
| 55 | R | A | -1.1284 | |
| 56 | S | A | -0.6521 | |
| 57 | Y | A | -0.7729 | |
| 58 | D | A | -1.7059 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3357 | |
| 61 | G | A | -1.4904 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.9422 | |
| 64 | P | A | -2.5102 | |
| 65 | G | A | -1.7501 | |
| 66 | T | A | -1.9145 | |
| 67 | E | A | -1.8713 | |
| 68 | Y | A | 0.0000 | |
| 69 | V | A | 0.0000 | |
| 70 | V | A | 0.0000 | |
| 71 | L | A | 1.0817 | |
| 72 | I | A | 0.0000 | |
| 73 | N | A | -0.2718 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -1.8497 | |
| 76 | K | A | -2.3371 | |
| 77 | G | A | -1.8113 | |
| 78 | G | A | -1.7243 | |
| 79 | P | A | -1.3886 | |
| 80 | E | A | -1.8543 | |
| 81 | S | A | 0.0000 | |
| 82 | W | A | 1.1503 | |
| 83 | P | A | 0.6339 | |
| 84 | L | A | 1.0588 | |
| 85 | I | A | 2.1783 | |
| 86 | A | A | 0.9025 | |
| 87 | H | A | -0.6326 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -1.3172 | |
| 90 | T | A | -1.7432 |