Project name: 349bddc5fb82875

Status: done

Started: 2026-05-21 15:30:37
Settings
Chain sequence(s) A: SGHKGHK
C: SGHKGHK
B: SGHKGHK
D: SGHKGHK
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:48)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:48)
Show buried residues

Minimal score value
-4.2276
Maximal score value
-0.9788
Average score
-3.0469
Total score value
-85.3121

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A -0.9788
2 G A -1.6046
3 H A -2.8357
4 K A -3.7362
5 G A -4.1798
6 H A -3.4682
7 K A -3.9793
1 S B -1.2923
2 G B -1.8064
3 H B -3.1092
4 K B -3.9139
5 G B -3.9274
6 H B -3.4315
7 K B -3.6210
1 S C -1.3825
2 G C -1.9501
3 H C -3.2554
4 K C -4.0604
5 G C -4.0622
6 H C -3.4697
7 K C -3.7954
1 S D -1.1093
2 G D -1.8002
3 H D -3.1611
4 K D -3.8067
5 G D -4.2276
6 H D -3.4820
7 K D -3.8652
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Laboratory of Theory of Biopolymers 2018