| Chain sequence(s) |
A: AKACTPLLHDCSHDRHSCCRGDMFKYVCDCFYPEGEDKTEVCSCQQPKSHKIAEKIIDKAKTTL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:33)
[INFO] Main: Simulation completed successfully. (00:00:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.6102 | |
| 2 | K | A | -1.4647 | |
| 3 | A | A | -0.3992 | |
| 4 | C | A | 0.0469 | |
| 5 | T | A | -0.7700 | |
| 6 | P | A | -0.2471 | |
| 7 | L | A | 0.3133 | |
| 8 | L | A | 0.5188 | |
| 9 | H | A | -0.7612 | |
| 10 | D | A | -2.4888 | |
| 11 | C | A | 0.0000 | |
| 12 | S | A | -2.6251 | |
| 13 | H | A | -2.8091 | |
| 14 | D | A | -3.7946 | |
| 15 | R | A | -3.5092 | |
| 16 | H | A | -2.6966 | |
| 17 | S | A | -2.0151 | |
| 18 | C | A | -1.5577 | |
| 19 | C | A | -0.8086 | |
| 20 | R | A | -2.2003 | |
| 21 | G | A | -1.6696 | |
| 22 | D | A | -1.6350 | |
| 23 | M | A | 0.2904 | |
| 24 | F | A | 0.4950 | |
| 25 | K | A | -1.5140 | |
| 26 | Y | A | -0.5112 | |
| 27 | V | A | 0.2866 | |
| 28 | C | A | -1.1826 | |
| 29 | D | A | -1.0214 | |
| 30 | C | A | -0.0712 | |
| 31 | F | A | 0.5907 | |
| 32 | Y | A | -0.4229 | |
| 33 | P | A | -0.8688 | |
| 34 | E | A | -2.5575 | |
| 35 | G | A | 0.0000 | |
| 36 | E | A | -3.4694 | |
| 37 | D | A | -3.8651 | |
| 38 | K | A | -3.6128 | |
| 39 | T | A | -2.4442 | |
| 40 | E | A | -1.9154 | |
| 41 | V | A | -0.5910 | |
| 42 | C | A | -0.9349 | |
| 43 | S | A | 0.0000 | |
| 44 | C | A | 0.0000 | |
| 45 | Q | A | -0.9077 | |
| 46 | Q | A | -1.2296 | |
| 47 | P | A | -1.4523 | |
| 48 | K | A | -2.5371 | |
| 49 | S | A | -1.7995 | |
| 50 | H | A | -2.1396 | |
| 51 | K | A | -1.9964 | |
| 52 | I | A | 0.0946 | |
| 53 | A | A | -0.5799 | |
| 54 | E | A | -1.8861 | |
| 55 | K | A | -1.0779 | |
| 56 | I | A | 0.7901 | |
| 57 | I | A | 1.0197 | |
| 58 | D | A | -1.2435 | |
| 59 | K | A | -2.0356 | |
| 60 | A | A | -1.3072 | |
| 61 | K | A | -1.8907 | |
| 62 | T | A | -0.7022 | |
| 63 | T | A | 0.3008 | |
| 64 | L | A | 1.2812 |