| Chain sequence(s) |
I: QPDPPANITVVTWQDPHSWNSSFYRLRFELRYRATWMVKDLQHHHVVQLRAQEEFGQGEWSEWSPE
H: QVQLQESGPGLVRPSQTLSLTCTVSGYSITSDHAWSWVRQPPGRGLEWIGYISYSGITTYNPSLKSRVTMLRDTSKNQFSLRLSSVTAADTAVYYCARSLARTTAMDYWGQGSLVTVSSASTKGPSVFPLAPTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP B: FRKSPLSNVV L: DIQMTQSPSSLSASVGDRVTITCRASQDISSYLNWYQQKPGKAPKLLIYYTSRLHSGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQGNTLPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF input PDB |
| Selected Chain(s) | I,H,B,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:18)
[INFO] Main: Simulation completed successfully. (00:05:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.4987 | |
| 2 | V | H | -1.1090 | |
| 3 | Q | H | -1.8937 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.8567 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.6275 | |
| 8 | G | H | -0.2871 | |
| 9 | P | H | -0.5669 | |
| 10 | G | H | -0.5044 | |
| 11 | L | H | -0.5313 | |
| 12 | V | H | 0.0000 | |
| 13 | R | H | -2.3219 | |
| 14 | P | H | -1.5104 | |
| 15 | S | H | -1.4228 | |
| 16 | Q | H | -1.9798 | |
| 17 | T | H | -1.4313 | |
| 18 | L | H | 0.0000 | |
| 19 | S | H | -0.7483 | |
| 20 | L | H | 0.0000 | |
| 21 | T | H | -0.5336 | |
| 22 | C | H | 0.0000 | |
| 23 | T | H | -1.1546 | |
| 24 | V | H | 0.0000 | |
| 25 | S | H | -1.2979 | |
| 26 | G | H | -0.9853 | |
| 27 | Y | H | -0.3651 | |
| 28 | S | H | -0.4169 | |
| 29 | I | H | 0.0000 | |
| 30 | T | H | -0.2633 | |
| 31 | S | H | -0.1814 | |
| 32 | D | H | 0.0000 | |
| 33 | H | H | -0.2418 | |
| 34 | A | H | 0.0000 | |
| 35 | W | H | 0.0000 | |
| 36 | S | H | 0.0000 | |
| 37 | W | H | 0.0000 | |
| 38 | V | H | 0.0000 | |
| 39 | R | H | 0.0000 | |
| 40 | Q | H | -0.8946 | |
| 41 | P | H | -0.9596 | |
| 42 | P | H | -0.9510 | |
| 43 | G | H | -1.5324 | |
| 44 | R | H | -2.5383 | |
| 45 | G | H | -1.7274 | |
| 46 | L | H | 0.0000 | |
| 47 | E | H | -1.5249 | |
| 48 | W | H | 0.0000 | |
| 49 | I | H | 0.0000 | |
| 50 | G | H | 0.0000 | |
| 51 | Y | H | 0.0000 | |
| 52 | I | H | 0.0000 | |
| 53 | S | H | 0.0000 | |
| 54 | Y | H | 0.0000 | |
| 55 | S | H | 0.4385 | |
| 56 | G | H | 0.1222 | |
| 57 | I | H | 0.5576 | |
| 58 | T | H | 0.2417 | |
| 59 | T | H | -0.1519 | |
| 60 | Y | H | -0.3116 | |
| 61 | N | H | -0.9667 | |
| 62 | P | H | -1.0438 | |
| 63 | S | H | -1.0387 | |
| 64 | L | H | -0.8720 | |
| 65 | K | H | -1.8589 | |
| 66 | S | H | -1.1821 | |
| 67 | R | H | -1.2490 | |
| 68 | V | H | 0.0000 | |
| 69 | T | H | -0.5740 | |
| 70 | M | H | 0.0000 | |
| 71 | L | H | 0.2235 | |
| 72 | R | H | -0.7565 | |
| 73 | D | H | -1.6982 | |
| 74 | T | H | -1.4243 | |
| 75 | S | H | -1.5432 | |
| 76 | K | H | -2.3248 | |
| 77 | N | H | -1.5719 | |
| 78 | Q | H | 0.0000 | |
| 79 | F | H | 0.0000 | |
| 80 | S | H | 0.0000 | |
| 81 | L | H | 0.0000 | |
| 82 | R | H | -1.1161 | |
| 83 | L | H | 0.0000 | |
| 84 | S | H | -1.0161 | |
| 85 | S | H | -1.2049 | |
| 86 | V | H | 0.0000 | |
| 87 | T | H | -0.6402 | |
| 88 | A | H | -0.2704 | |
| 89 | A | H | 0.0443 | |
| 90 | D | H | 0.0000 | |
| 91 | T | H | 0.0604 | |
| 92 | A | H | 0.0000 | |
| 93 | V | H | 0.1362 | |
| 94 | Y | H | 0.0000 | |
| 95 | Y | H | 0.0000 | |
| 96 | C | H | 0.0000 | |
| 97 | A | H | 0.0000 | |
| 98 | R | H | 0.0000 | |
| 99 | S | H | 0.0000 | |
| 100 | L | H | 0.0000 | |
| 101 | A | H | 0.0000 | |
| 102 | R | H | 0.0000 | |
| 103 | T | H | 0.0000 | |
| 104 | T | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | M | H | 0.0000 | |
| 107 | D | H | -0.0996 | |
| 108 | Y | H | -0.1175 | |
| 109 | W | H | 0.0000 | |
| 110 | G | H | 0.0000 | |
| 111 | Q | H | -1.9812 | |
| 112 | G | H | 0.0000 | |
| 113 | S | H | -0.3578 | |
| 114 | L | H | 0.0755 | |
| 115 | V | H | 0.0000 | |
| 116 | T | H | -0.3148 | |
| 117 | V | H | 0.0000 | |
| 118 | S | H | -0.7095 | |
| 119 | S | H | -0.8466 | |
| 120 | A | H | -0.6570 | |
| 121 | S | H | -0.8347 | |
| 122 | T | H | -1.2622 | |
| 123 | K | H | -1.7610 | |
| 124 | G | H | -1.6695 | |
| 125 | P | H | 0.0000 | |
| 126 | S | H | -0.5911 | |
| 127 | V | H | 0.0000 | |
| 128 | F | H | -0.8601 | |
| 129 | P | H | -1.1925 | |
| 130 | L | H | 0.0000 | |
| 131 | A | H | -0.8563 | |
| 132 | P | H | -0.4658 | |
| 141 | T | H | -0.2248 | |
| 142 | A | H | -0.1322 | |
| 143 | A | H | 0.0000 | |
| 144 | L | H | 0.0000 | |
| 145 | G | H | 0.0000 | |
| 146 | C | H | 0.0000 | |
| 147 | L | H | 0.0000 | |
| 148 | V | H | 0.0000 | |
| 149 | K | H | 0.0000 | |
| 150 | D | H | -0.9244 | |
| 151 | Y | H | 0.0000 | |
| 152 | F | H | -0.4435 | |
| 153 | P | H | 0.0000 | |
| 154 | E | H | -0.8040 | |
| 155 | P | H | -0.7387 | |
| 156 | V | H | -0.8261 | |
| 157 | T | H | -0.5279 | |
| 158 | V | H | 0.0000 | |
| 159 | S | H | -0.5312 | |
| 160 | W | H | 0.0000 | |
| 161 | N | H | -0.7568 | |
| 162 | S | H | -0.7212 | |
| 163 | G | H | -0.6204 | |
| 164 | A | H | -0.1836 | |
| 165 | L | H | 0.0708 | |
| 166 | T | H | -0.0626 | |
| 167 | S | H | -0.2103 | |
| 168 | G | H | -0.1202 | |
| 169 | V | H | 0.4946 | |
| 170 | H | H | 0.0000 | |
| 171 | T | H | -0.0125 | |
| 172 | F | H | 0.0000 | |
| 173 | P | H | -0.4219 | |
| 174 | A | H | 0.2020 | |
| 175 | V | H | 0.7864 | |
| 176 | L | H | 1.5580 | |
| 177 | Q | H | 0.3178 | |
| 178 | S | H | -0.0661 | |
| 179 | S | H | -0.1989 | |
| 180 | G | H | 0.2139 | |
| 181 | L | H | 0.0000 | |
| 182 | Y | H | 0.3851 | |
| 183 | S | H | 0.0000 | |
| 184 | L | H | 0.0000 | |
| 185 | S | H | 0.0000 | |
| 186 | S | H | 0.0000 | |
| 187 | V | H | 0.0000 | |
| 188 | V | H | 0.0000 | |
| 189 | T | H | -0.0263 | |
| 190 | V | H | 0.0000 | |
| 191 | P | H | -0.3851 | |
| 192 | S | H | -0.4146 | |
| 193 | S | H | -0.5266 | |
| 194 | S | H | -0.6126 | |
| 195 | L | H | -0.7707 | |
| 196 | G | H | -1.0486 | |
| 197 | T | H | -0.7257 | |
| 198 | Q | H | -1.1744 | |
| 199 | T | H | -1.1538 | |
| 200 | Y | H | 0.0000 | |
| 201 | I | H | -1.0722 | |
| 202 | C | H | 0.0000 | |
| 203 | N | H | -1.7675 | |
| 204 | V | H | 0.0000 | |
| 205 | N | H | -2.1449 | |
| 206 | H | H | 0.0000 | |
| 207 | K | H | -2.3118 | |
| 208 | P | H | -1.5269 | |
| 209 | S | H | -1.7983 | |
| 210 | N | H | -2.4484 | |
| 211 | T | H | -2.2196 | |
| 212 | K | H | -2.8213 | |
| 213 | V | H | -1.7562 | |
| 214 | D | H | -2.6718 | |
| 215 | K | H | -2.1480 | |
| 216 | K | H | -2.4096 | |
| 217 | V | H | 0.0000 | |
| 218 | E | H | -2.4675 | |
| 219 | P | H | -1.2194 | |
| 1 | D | L | -2.1346 | |
| 2 | I | L | -1.9010 | |
| 3 | Q | L | -2.0043 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.0304 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7587 | |
| 8 | P | L | -0.6117 | |
| 9 | S | L | -0.8173 | |
| 10 | S | L | -0.8311 | |
| 11 | L | L | -0.5931 | |
| 12 | S | L | -0.8265 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.7232 | |
| 15 | V | L | 0.0902 | |
| 16 | G | L | -0.9155 | |
| 17 | D | L | -1.9362 | |
| 18 | R | L | -2.4165 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6440 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.8038 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.4600 | |
| 25 | A | L | -2.0592 | |
| 26 | S | L | -1.9106 | |
| 27 | Q | L | -2.6110 | |
| 28 | D | L | -2.8065 | |
| 29 | I | L | 0.0000 | |
| 30 | S | L | -0.9203 | |
| 31 | S | L | -0.5070 | |
| 32 | Y | L | 0.0000 | |
| 33 | L | L | 0.0000 | |
| 34 | N | L | 0.0000 | |
| 35 | W | L | 0.0000 | |
| 36 | Y | L | 0.0000 | |
| 37 | Q | L | -0.8153 | |
| 38 | Q | L | 0.0000 | |
| 39 | K | L | -1.5210 | |
| 40 | P | L | -1.3370 | |
| 41 | G | L | -1.6359 | |
| 42 | K | L | -2.4219 | |
| 43 | A | L | -1.4530 | |
| 44 | P | L | 0.0000 | |
| 45 | K | L | -0.9949 | |
| 46 | L | L | 0.0000 | |
| 47 | L | L | 0.0000 | |
| 48 | I | L | 0.0000 | |
| 49 | Y | L | 0.0000 | |
| 50 | Y | L | 0.0000 | |
| 51 | T | L | 0.0000 | |
| 52 | S | L | -1.1335 | |
| 53 | R | L | -1.8104 | |
| 54 | L | L | -0.6755 | |
| 55 | H | L | -0.6673 | |
| 56 | S | L | -0.5680 | |
| 57 | G | L | -0.5288 | |
| 58 | V | L | -0.1866 | |
| 59 | P | L | -0.2979 | |
| 60 | S | L | -0.3472 | |
| 61 | R | L | -0.7439 | |
| 62 | F | L | 0.0000 | |
| 63 | S | L | -0.5723 | |
| 64 | G | L | -0.5653 | |
| 65 | S | L | -0.9108 | |
| 66 | G | L | -1.1650 | |
| 67 | S | L | -1.3641 | |
| 68 | G | L | 0.0000 | |
| 69 | T | L | -2.3303 | |
| 70 | D | L | -2.7395 | |
| 71 | F | L | 0.0000 | |
| 72 | T | L | -0.7958 | |
| 73 | F | L | 0.0000 | |
| 74 | T | L | -0.7833 | |
| 75 | I | L | 0.0000 | |
| 76 | S | L | -1.4415 | |
| 77 | S | L | -1.2610 | |
| 78 | L | L | 0.0000 | |
| 79 | Q | L | -1.0074 | |
| 80 | P | L | -1.7681 | |
| 81 | E | L | -1.8443 | |
| 82 | D | L | 0.0000 | |
| 83 | I | L | 0.0000 | |
| 84 | A | L | 0.0000 | |
| 85 | T | L | -1.1575 | |
| 86 | Y | L | 0.0000 | |
| 87 | Y | L | 0.0000 | |
| 88 | C | L | 0.0000 | |
| 89 | Q | L | 0.0000 | |
| 90 | Q | L | 0.0000 | |
| 91 | G | L | 0.0000 | |
| 92 | N | L | 0.0000 | |
| 93 | T | L | -0.9288 | |
| 94 | L | L | 0.0000 | |
| 95 | P | L | -1.0078 | |
| 96 | Y | L | 0.0000 | |
| 97 | T | L | -1.0438 | |
| 98 | F | L | 0.0000 | |
| 99 | G | L | 0.0000 | |
| 100 | Q | L | -1.6618 | |
| 101 | G | L | -1.3382 | |
| 102 | T | L | 0.0000 | |
| 103 | K | L | -1.6835 | |
| 104 | V | L | 0.0000 | |
| 105 | E | L | -0.9426 | |
| 106 | I | L | 0.0000 | |
| 107 | K | L | -0.8536 | |
| 108 | R | L | -0.8212 | |
| 109 | T | L | 0.2039 | |
| 110 | V | L | 1.2005 | |
| 111 | A | L | 0.3388 | |
| 112 | A | L | 0.1365 | |
| 113 | P | L | 0.0000 | |
| 114 | S | L | -0.1413 | |
| 115 | V | L | 0.0000 | |
| 116 | F | L | 0.2137 | |
| 117 | I | L | 0.1415 | |
| 118 | F | L | 0.0000 | |
| 119 | P | L | -0.5709 | |
| 120 | P | L | 0.0000 | |
| 121 | S | L | -2.1884 | |
| 122 | D | L | -3.3120 | |
| 123 | E | L | -3.4738 | |
| 124 | Q | L | -2.8503 | |
| 125 | L | L | 0.0000 | |
| 126 | K | L | -2.6781 | |
| 127 | S | L | -1.9460 | |
| 128 | G | L | -1.1687 | |
| 129 | T | L | -1.2139 | |
| 130 | A | L | 0.0000 | |
| 131 | S | L | 0.0000 | |
| 132 | V | L | 0.0000 | |
| 133 | V | L | 0.0000 | |
| 134 | C | L | 0.0000 | |
| 135 | L | L | 0.0000 | |
| 136 | L | L | 0.0000 | |
| 137 | N | L | 0.0000 | |
| 138 | N | L | -0.8443 | |
| 139 | F | L | 0.0000 | |
| 140 | Y | L | -0.4533 | |
| 141 | P | L | -1.1494 | |
| 142 | R | L | -2.3170 | |
| 143 | E | L | -2.9734 | |
| 144 | A | L | -2.2317 | |
| 145 | K | L | -2.7154 | |
| 146 | V | L | -1.7639 | |
| 147 | Q | L | -1.7081 | |
| 148 | W | L | 0.0000 | |
| 149 | K | L | -0.8851 | |
| 150 | V | L | 0.1577 | |
| 151 | D | L | -1.8110 | |
| 152 | N | L | -2.1261 | |
| 153 | A | L | -1.1693 | |
| 154 | L | L | -0.9481 | |
| 155 | Q | L | -1.6276 | |
| 156 | S | L | -0.9862 | |
| 157 | G | L | -1.2373 | |
| 158 | N | L | -1.1465 | |
| 159 | S | L | -1.2789 | |
| 160 | Q | L | -1.1657 | |
| 161 | E | L | -2.0687 | |
| 162 | S | L | -0.7868 | |
| 163 | V | L | -0.5999 | |
| 164 | T | L | -0.7284 | |
| 165 | E | L | -1.4911 | |
| 166 | Q | L | 0.0000 | |
| 167 | D | L | -2.6322 | |
| 168 | S | L | -2.4967 | |
| 169 | K | L | -3.2478 | |
| 170 | D | L | -3.2470 | |
| 171 | S | L | 0.0000 | |
| 172 | T | L | 0.0000 | |
| 173 | Y | L | 0.0000 | |
| 174 | S | L | 0.0000 | |
| 175 | L | L | 0.0000 | |
| 176 | S | L | 0.0000 | |
| 177 | S | L | 0.0000 | |
| 178 | T | L | 0.0000 | |
| 179 | L | L | 0.0000 | |
| 180 | T | L | -0.4618 | |
| 181 | L | L | -0.8098 | |
| 182 | S | L | -1.5770 | |
| 183 | K | L | -2.7103 | |
| 184 | A | L | -2.2787 | |
| 185 | D | L | -3.1089 | |
| 186 | Y | L | -2.8952 | |
| 187 | E | L | -3.6031 | |
| 188 | K | L | -3.5531 | |
| 189 | H | L | -2.7839 | |
| 190 | K | L | -2.1654 | |
| 191 | V | L | -0.6157 | |
| 192 | Y | L | 0.0000 | |
| 193 | A | L | 0.0000 | |
| 194 | C | L | 0.0000 | |
| 195 | E | L | -1.2262 | |
| 196 | V | L | 0.0000 | |
| 197 | T | L | -1.3716 | |
| 198 | H | L | 0.0000 | |
| 199 | Q | L | -1.6839 | |
| 200 | G | L | -0.4458 | |
| 201 | L | L | -0.3807 | |
| 202 | S | L | -0.4932 | |
| 203 | S | L | -0.4658 | |
| 204 | P | L | -0.6614 | |
| 205 | V | L | -0.0113 | |
| 206 | T | L | -0.2595 | |
| 207 | K | L | -0.5485 | |
| 208 | S | L | -0.3916 | |
| 209 | F | L | -0.5025 | |
| 215 | Q | I | -1.4679 | |
| 216 | P | I | 0.0000 | |
| 217 | D | I | -1.3876 | |
| 218 | P | I | -1.2763 | |
| 219 | P | I | 0.0000 | |
| 220 | A | I | -1.3479 | |
| 221 | N | I | -1.5664 | |
| 222 | I | I | -0.2328 | |
| 223 | T | I | 0.8998 | |
| 224 | V | I | 2.0884 | |
| 236 | V | I | 1.3345 | |
| 237 | T | I | -0.1001 | |
| 238 | W | I | 0.0000 | |
| 239 | Q | I | -1.8722 | |
| 240 | D | I | -1.8909 | |
| 241 | P | I | 0.0000 | |
| 242 | H | I | -1.7857 | |
| 243 | S | I | -1.4057 | |
| 244 | W | I | 0.0000 | |
| 245 | N | I | -1.6582 | |
| 246 | S | I | -0.3050 | |
| 247 | S | I | 0.2560 | |
| 248 | F | I | 1.7109 | |
| 249 | Y | I | 0.0000 | |
| 250 | R | I | -0.5662 | |
| 251 | L | I | 0.0000 | |
| 252 | R | I | 0.0000 | |
| 253 | F | I | 0.0000 | |
| 254 | E | I | 0.0000 | |
| 255 | L | I | 0.0000 | |
| 256 | R | I | -0.1303 | |
| 257 | Y | I | 0.0604 | |
| 258 | R | I | -1.2336 | |
| 259 | A | I | -0.6073 | |
| 267 | T | I | -0.0062 | |
| 268 | W | I | 0.5330 | |
| 269 | M | I | -0.1103 | |
| 270 | V | I | 0.0000 | |
| 271 | K | I | -1.5880 | |
| 272 | D | I | -1.5855 | |
| 273 | L | I | -1.0961 | |
| 274 | Q | I | -1.8498 | |
| 275 | H | I | -1.6194 | |
| 276 | H | I | -1.4752 | |
| 288 | H | I | -0.2639 | |
| 289 | V | I | 0.5339 | |
| 290 | V | I | 0.0000 | |
| 291 | Q | I | -0.6974 | |
| 292 | L | I | 0.0000 | |
| 293 | R | I | -0.7973 | |
| 294 | A | I | 0.0000 | |
| 295 | Q | I | 0.0000 | |
| 296 | E | I | 0.0000 | |
| 297 | E | I | 0.0000 | |
| 298 | F | I | 0.0000 | |
| 299 | G | I | 0.0000 | |
| 300 | Q | I | -1.0812 | |
| 301 | G | I | -1.4743 | |
| 302 | E | I | -2.2746 | |
| 303 | W | I | -1.5985 | |
| 304 | S | I | 0.0000 | |
| 305 | E | I | -2.1900 | |
| 306 | W | I | -1.2220 | |
| 307 | S | I | 0.0000 | |
| 308 | P | I | -1.1300 | |
| 309 | E | I | -1.3260 | |
| 103 | F | B | 1.7075 | |
| 104 | R | B | 0.4018 | |
| 105 | K | B | -0.4029 | |
| 106 | S | B | 0.0000 | |
| 107 | P | B | 0.2373 | |
| 108 | L | B | 1.4382 | |
| 109 | S | B | 0.3125 | |
| 110 | N | B | 0.3250 | |
| 111 | V | B | 2.2924 | |
| 112 | V | B | 2.4986 |