| Chain sequence(s) |
A: HVQLVESGGGSVQAGGSLRLTCAASGFTFSNYYMSWVRQAPGKGLEWVSSIYSVGSNGYYADSVKGRSTISRDNAKNTLYLQMNSLKPEDTAVYYCAAEPGGSWWDAYSYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:04)
[INFO] Main: Simulation completed successfully. (00:01:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | H | A | -1.0514 | |
| 2 | V | A | -0.3224 | |
| 3 | Q | A | -0.9647 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.2148 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.6367 | |
| 8 | G | A | -1.1849 | |
| 9 | G | A | -1.1740 | |
| 10 | G | A | -0.9424 | |
| 11 | S | A | -0.7374 | |
| 12 | V | A | -0.7969 | |
| 13 | Q | A | -1.6279 | |
| 14 | A | A | -1.6470 | |
| 15 | G | A | -1.3273 | |
| 16 | G | A | -1.0353 | |
| 17 | S | A | -1.1471 | |
| 18 | L | A | -1.0383 | |
| 19 | R | A | -1.9866 | |
| 20 | L | A | 0.0000 | |
| 21 | T | A | -0.4465 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.4503 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.9141 | |
| 26 | G | A | -0.7392 | |
| 27 | F | A | -0.4238 | |
| 28 | T | A | -0.5289 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -0.5864 | |
| 31 | N | A | -1.2905 | |
| 32 | Y | A | -0.3866 | |
| 33 | Y | A | 0.2597 | |
| 34 | M | A | 0.0000 | |
| 35 | S | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -0.5902 | |
| 40 | A | A | -1.3073 | |
| 41 | P | A | -1.3471 | |
| 42 | G | A | -1.5873 | |
| 43 | K | A | -2.0741 | |
| 44 | G | A | -0.7966 | |
| 45 | L | A | 0.8563 | |
| 46 | E | A | 0.3994 | |
| 47 | W | A | 1.2336 | |
| 48 | V | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | S | A | 0.6809 | |
| 51 | I | A | 0.0000 | |
| 52 | Y | A | 0.6113 | |
| 53 | S | A | 0.4287 | |
| 54 | V | A | 1.2115 | |
| 55 | G | A | 0.0519 | |
| 56 | S | A | -0.2214 | |
| 57 | N | A | -0.8734 | |
| 58 | G | A | 0.1264 | |
| 59 | Y | A | 0.8589 | |
| 60 | Y | A | -0.1669 | |
| 61 | A | A | 0.0000 | |
| 62 | D | A | -2.1457 | |
| 63 | S | A | -1.6827 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.4377 | |
| 66 | G | A | -1.8015 | |
| 67 | R | A | -1.4427 | |
| 68 | S | A | 0.0000 | |
| 69 | T | A | -0.7072 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.0693 | |
| 72 | R | A | 0.0000 | |
| 73 | D | A | -0.9471 | |
| 74 | N | A | -1.2296 | |
| 75 | A | A | -1.2938 | |
| 76 | K | A | -2.2419 | |
| 77 | N | A | -1.7442 | |
| 78 | T | A | -1.0009 | |
| 79 | L | A | 0.0000 | |
| 80 | Y | A | -0.4385 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.1737 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.4325 | |
| 85 | S | A | -1.2158 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.2275 | |
| 88 | P | A | -1.8393 | |
| 89 | E | A | -2.3032 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -1.1596 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.3733 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | 0.1851 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | E | A | -0.4732 | |
| 100 | P | A | -0.5741 | |
| 101 | G | A | -0.4816 | |
| 102 | G | A | -0.2985 | |
| 103 | S | A | 0.1125 | |
| 104 | W | A | 1.1950 | |
| 105 | W | A | 0.8529 | |
| 106 | D | A | -1.0107 | |
| 107 | A | A | -0.4042 | |
| 108 | Y | A | 0.0155 | |
| 109 | S | A | -0.1289 | |
| 110 | Y | A | 0.4449 | |
| 111 | W | A | 0.4446 | |
| 112 | G | A | -0.1602 | |
| 113 | Q | A | -1.1161 | |
| 114 | G | A | -0.6433 | |
| 115 | T | A | 0.0000 | |
| 116 | Q | A | -1.4726 | |
| 117 | V | A | 0.0000 | |
| 118 | T | A | -1.0031 | |
| 119 | V | A | 0.0000 | |
| 120 | S | A | -1.2161 | |
| 121 | S | A | -0.8883 |