Project name: query_structure

Status: done

Started: 2026-03-16 23:48:29
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Chain sequence(s) A: HVQLVESGGGSVQAGGSLRLTCAASGFTFSNYYMSWVRQAPGKGLEWVSSIYSVGSNGYYADSVKGRSTISRDNAKNTLYLQMNSLKPEDTAVYYCAAEPGGSWWDAYSYWGQGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:04)
Show buried residues

Minimal score value
-2.4377
Maximal score value
1.2336
Average score
-0.5202
Total score value
-62.9456

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 H A -1.0514
2 V A -0.3224
3 Q A -0.9647
4 L A 0.0000
5 V A 0.2148
6 E A 0.0000
7 S A -0.6367
8 G A -1.1849
9 G A -1.1740
10 G A -0.9424
11 S A -0.7374
12 V A -0.7969
13 Q A -1.6279
14 A A -1.6470
15 G A -1.3273
16 G A -1.0353
17 S A -1.1471
18 L A -1.0383
19 R A -1.9866
20 L A 0.0000
21 T A -0.4465
22 C A 0.0000
23 A A -0.4503
24 A A 0.0000
25 S A -0.9141
26 G A -0.7392
27 F A -0.4238
28 T A -0.5289
29 F A 0.0000
30 S A -0.5864
31 N A -1.2905
32 Y A -0.3866
33 Y A 0.2597
34 M A 0.0000
35 S A 0.0000
36 W A 0.0000
37 V A 0.0000
38 R A 0.0000
39 Q A -0.5902
40 A A -1.3073
41 P A -1.3471
42 G A -1.5873
43 K A -2.0741
44 G A -0.7966
45 L A 0.8563
46 E A 0.3994
47 W A 1.2336
48 V A 0.0000
49 S A 0.0000
50 S A 0.6809
51 I A 0.0000
52 Y A 0.6113
53 S A 0.4287
54 V A 1.2115
55 G A 0.0519
56 S A -0.2214
57 N A -0.8734
58 G A 0.1264
59 Y A 0.8589
60 Y A -0.1669
61 A A 0.0000
62 D A -2.1457
63 S A -1.6827
64 V A 0.0000
65 K A -2.4377
66 G A -1.8015
67 R A -1.4427
68 S A 0.0000
69 T A -0.7072
70 I A 0.0000
71 S A -0.0693
72 R A 0.0000
73 D A -0.9471
74 N A -1.2296
75 A A -1.2938
76 K A -2.2419
77 N A -1.7442
78 T A -1.0009
79 L A 0.0000
80 Y A -0.4385
81 L A 0.0000
82 Q A -1.1737
83 M A 0.0000
84 N A -1.4325
85 S A -1.2158
86 L A 0.0000
87 K A -2.2275
88 P A -1.8393
89 E A -2.3032
90 D A 0.0000
91 T A -1.1596
92 A A 0.0000
93 V A -0.3733
94 Y A 0.0000
95 Y A 0.1851
96 C A 0.0000
97 A A 0.0000
98 A A 0.0000
99 E A -0.4732
100 P A -0.5741
101 G A -0.4816
102 G A -0.2985
103 S A 0.1125
104 W A 1.1950
105 W A 0.8529
106 D A -1.0107
107 A A -0.4042
108 Y A 0.0155
109 S A -0.1289
110 Y A 0.4449
111 W A 0.4446
112 G A -0.1602
113 Q A -1.1161
114 G A -0.6433
115 T A 0.0000
116 Q A -1.4726
117 V A 0.0000
118 T A -1.0031
119 V A 0.0000
120 S A -1.2161
121 S A -0.8883
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Laboratory of Theory of Biopolymers 2018