| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIIVNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPVHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPDGHPPPSGPPPSPLYTPPPPGSPYAVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPVPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.8759 | |
| 2 | L | A | 1.8230 | |
| 3 | P | A | 0.5056 | |
| 4 | P | A | 0.2435 | |
| 5 | T | A | 0.0051 | |
| 6 | T | A | 0.1618 | |
| 7 | P | A | 0.2390 | |
| 8 | V | A | 1.0120 | |
| 9 | A | A | 0.0780 | |
| 10 | K | A | -0.9820 | |
| 11 | V | A | -0.2177 | |
| 12 | Q | A | -1.0817 | |
| 13 | S | A | -1.4961 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3984 | |
| 16 | E | A | -2.3964 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4538 | |
| 20 | P | A | 0.1255 | |
| 21 | T | A | 0.1657 | |
| 22 | S | A | -0.0946 | |
| 23 | L | A | 0.1130 | |
| 24 | F | A | -0.0089 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1136 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.5761 | |
| 31 | R | A | -2.5259 | |
| 32 | L | A | -0.7129 | |
| 33 | L | A | 1.2612 | |
| 34 | T | A | 1.4937 | |
| 35 | V | A | 2.0639 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2033 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.5954 | |
| 40 | K | A | -1.7334 | |
| 41 | D | A | -0.4826 | |
| 42 | I | A | 1.5103 | |
| 43 | I | A | 2.6025 | |
| 44 | V | A | 1.8239 | |
| 45 | N | A | -0.4487 | |
| 46 | G | A | -0.2660 | |
| 47 | K | A | -0.0038 | |
| 48 | V | A | 2.3805 | |
| 49 | L | A | 2.6700 | |
| 50 | V | A | 1.6084 | |
| 51 | P | A | 0.4941 | |
| 52 | K | A | -0.5961 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1238 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4776 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2662 | |
| 70 | K | A | -1.8086 | |
| 71 | F | A | -0.6670 | |
| 72 | A | A | -0.5933 | |
| 73 | L | A | -0.9304 | |
| 74 | P | A | -1.2577 | |
| 75 | Q | A | -2.4828 | |
| 76 | K | A | -3.0978 | |
| 77 | D | A | -2.9875 | |
| 78 | F | A | -1.6403 | |
| 79 | Y | A | -1.9136 | |
| 80 | D | A | -2.7661 | |
| 81 | P | A | -2.3606 | |
| 82 | E | A | -3.0800 | |
| 83 | K | A | -3.4525 | |
| 84 | E | A | -2.5186 | |
| 85 | R | A | -1.3248 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6455 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9561 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3211 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7370 | |
| 99 | G | A | -0.5266 | |
| 100 | P | A | -0.4156 | |
| 101 | L | A | 0.0151 | |
| 102 | G | A | -0.2876 | |
| 103 | K | A | -0.7661 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4719 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1525 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4285 | |
| 110 | L | A | 0.3006 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0551 | |
| 113 | K | A | -0.3731 | |
| 114 | L | A | -0.9647 | |
| 115 | G | A | -0.9396 | |
| 116 | D | A | -1.3784 | |
| 117 | T | A | -0.8673 | |
| 118 | E | A | -1.9887 | |
| 119 | N | A | -2.3051 | |
| 120 | P | A | -1.9056 | |
| 121 | T | A | -1.5796 | |
| 122 | E | A | -2.2023 | |
| 123 | P | A | -0.6389 | |
| 124 | V | A | -0.4739 | |
| 125 | H | A | -1.3448 | |
| 126 | E | A | -1.8360 | |
| 127 | G | A | -1.9131 | |
| 128 | A | A | -1.4594 | |
| 129 | D | A | -2.3539 | |
| 130 | D | A | -1.9691 | |
| 131 | R | A | -1.1087 | |
| 132 | V | A | 0.2380 | |
| 133 | A | A | 0.4479 | |
| 134 | F | A | 0.2795 | |
| 135 | S | A | -0.0694 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5487 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5722 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2368 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1045 | |
| 157 | D | A | 0.2635 | |
| 158 | L | A | 0.6952 | |
| 159 | A | A | 0.1128 | |
| 160 | E | A | -1.4690 | |
| 161 | P | A | -0.2189 | |
| 162 | C | A | 0.1918 | |
| 163 | P | A | -0.1613 | |
| 164 | G | A | -0.0661 | |
| 165 | L | A | 0.6048 | |
| 166 | P | A | -0.1056 | |
| 167 | P | A | -0.3361 | |
| 168 | G | A | -0.4112 | |
| 169 | A | A | -0.0034 | |
| 170 | C | A | 0.6832 | |
| 171 | P | A | 0.5140 | |
| 172 | P | A | 0.7575 | |
| 173 | I | A | 1.9414 | |
| 174 | Q | A | 0.7936 | |
| 175 | L | A | 1.4385 | |
| 176 | V | A | 0.8174 | |
| 177 | N | A | -0.3310 | |
| 178 | S | A | 0.0177 | |
| 179 | V | A | 0.4013 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3674 | |
| 182 | D | A | 0.0697 | |
| 183 | G | A | -0.1635 | |
| 184 | D | A | -0.5654 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1500 | |
| 190 | F | A | 0.0498 | |
| 191 | G | A | -0.1119 | |
| 192 | N | A | -0.2787 | |
| 193 | M | A | -0.1614 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4156 | |
| 197 | E | A | -2.6377 | |
| 198 | L | A | -1.2559 | |
| 199 | Q | A | -2.5517 | |
| 200 | Q | A | -3.3425 | |
| 201 | D | A | -3.6060 | |
| 202 | R | A | -3.3500 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2093 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3706 | |
| 211 | S | A | -1.8772 | |
| 212 | T | A | -1.4571 | |
| 213 | R | A | -2.1426 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1710 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2900 | |
| 220 | L | A | 0.4910 | |
| 221 | K | A | -1.3280 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9684 | |
| 224 | N | A | -1.6971 | |
| 225 | E | A | -1.3147 | |
| 226 | A | A | -0.6450 | |
| 227 | Y | A | -0.4043 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7097 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1373 | |
| 234 | F | A | 0.0345 | |
| 235 | G | A | -0.9073 | |
| 236 | R | A | -2.6457 | |
| 237 | R | A | -2.8686 | |
| 238 | E | A | -2.0879 | |
| 239 | Q | A | -0.0887 | |
| 240 | V | A | 1.5443 | |
| 241 | Y | A | 1.2486 | |
| 242 | A | A | 0.1493 | |
| 243 | R | A | -1.2784 | |
| 244 | H | A | -1.0708 | |
| 245 | F | A | -0.0407 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.4698 | |
| 249 | C | A | -1.0827 | |
| 250 | G | A | -0.9621 | |
| 251 | P | A | -1.1731 | |
| 252 | D | A | -1.5438 | |
| 253 | G | A | -1.2982 | |
| 254 | H | A | -1.5449 | |
| 255 | P | A | -1.4572 | |
| 256 | P | A | -0.5219 | |
| 257 | P | A | -0.3256 | |
| 258 | S | A | -0.5116 | |
| 259 | G | A | -0.4366 | |
| 260 | P | A | -0.6389 | |
| 261 | P | A | -0.4727 | |
| 262 | P | A | -0.3368 | |
| 263 | S | A | 0.0502 | |
| 264 | P | A | 0.4453 | |
| 265 | L | A | 1.4825 | |
| 266 | Y | A | 0.9456 | |
| 267 | T | A | 0.1132 | |
| 268 | P | A | -0.1857 | |
| 269 | P | A | -0.0556 | |
| 270 | P | A | -0.4326 | |
| 271 | P | A | -0.5101 | |
| 272 | G | A | -0.3043 | |
| 273 | S | A | 0.2070 | |
| 274 | P | A | 0.1882 | |
| 275 | Y | A | 1.1920 | |
| 276 | A | A | 0.7564 | |
| 277 | V | A | 1.1476 | |
| 278 | R | A | -0.6076 | |
| 279 | P | A | -0.5901 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.6950 | |
| 282 | D | A | -0.6598 | |
| 283 | Y | A | 1.0039 | |
| 284 | F | A | 0.7499 | |
| 285 | G | A | 0.1854 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9331 | |
| 291 | L | A | 1.6138 | |
| 292 | V | A | 0.6035 | |
| 293 | S | A | -0.1637 | |
| 294 | S | A | -0.9699 | |
| 295 | D | A | -1.8449 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1225 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6401 | |
| 301 | R | A | -1.8678 | |
| 302 | P | A | -0.9516 | |
| 303 | F | A | -0.1750 | |
| 304 | W | A | -0.5122 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0820 | |
| 307 | R | A | -2.9234 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7776 | |
| 310 | G | A | -1.4077 | |
| 311 | N | A | -1.3304 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9630 | |
| 319 | N | A | -0.9018 | |
| 320 | E | A | -1.0642 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3634 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1899 | |
| 333 | N | A | 0.3864 | |
| 334 | F | A | 1.4435 | |
| 335 | T | A | 0.7363 | |
| 336 | I | A | 0.4122 | |
| 337 | S | A | -0.9686 | |
| 338 | Q | A | -1.7267 | |
| 339 | Q | A | -1.1609 | |
| 340 | L | A | 0.7137 | |
| 341 | C | A | 0.6055 | |
| 342 | T | A | 0.4310 | |
| 343 | P | A | 0.1888 | |
| 344 | V | A | 1.0891 | |
| 345 | P | A | 0.5478 | |
| 346 | N | A | -0.0082 | |
| 347 | V | A | 1.7011 | |
| 348 | Y | A | 1.5892 | |
| 349 | D | A | 0.2027 | |
| 350 | P | A | -0.3984 | |
| 351 | S | A | -0.3463 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7166 | |
| 354 | K | A | -1.8278 | |
| 355 | N | A | -1.7724 | |
| 356 | Y | A | -0.1057 | |
| 357 | L | A | 0.5623 | |
| 358 | R | A | 0.9102 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.5125 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0001 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8787 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6449 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2737 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3504 | |
| 376 | L | A | -1.8045 | |
| 377 | D | A | -2.0813 | |
| 378 | P | A | -0.9323 | |
| 379 | G | A | -0.7358 | |
| 380 | V | A | -0.9073 | |
| 381 | L | A | -0.2782 | |
| 382 | A | A | -0.0407 | |
| 383 | H | A | -0.1371 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -0.3679 | |
| 386 | T | A | -0.0245 | |
| 387 | M | A | -0.1254 | |
| 388 | N | A | -0.6443 | |
| 389 | P | A | -0.8760 | |
| 390 | T | A | -1.4945 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4706 | |
| 393 | E | A | -2.9427 | |
| 394 | N | A | -2.8373 | |
| 395 | W | A | -1.6177 | |
| 396 | N | A | -1.2933 | |
| 397 | L | A | -0.2647 | |
| 398 | G | A | 0.4916 | |
| 399 | F | A | 2.4085 | |
| 400 | V | A | 1.8387 | |
| 401 | P | A | 0.0448 | |
| 402 | P | A | -2.0201 | |
| 403 | K | A | -3.5482 | |
| 404 | E | A | -4.0905 | |
| 405 | R | A | -4.6134 | |
| 406 | E | A | -4.0948 | |
| 407 | D | A | -3.0112 | |
| 408 | P | A | -1.8366 | |
| 409 | Y | A | -0.9820 | |
| 410 | K | A | -2.0949 | |
| 411 | G | A | -0.6270 | |
| 412 | L | A | 0.6672 | |
| 413 | I | A | 1.5833 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3927 | |
| 416 | E | A | -1.6379 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8439 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8987 | |
| 421 | E | A | -2.5180 | |
| 422 | R | A | -2.0814 | |
| 423 | F | A | -1.0276 | |
| 424 | S | A | -1.2980 | |
| 425 | Q | A | -1.7236 | |
| 426 | D | A | -2.8412 | |
| 427 | L | A | -1.9416 | |
| 428 | D | A | -2.7120 | |
| 429 | Q | A | -2.5756 | |
| 430 | F | A | -1.4166 | |
| 431 | A | A | -0.8800 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5351 | |
| 435 | K | A | -0.6865 | |
| 436 | F | A | 0.1778 | |
| 437 | L | A | 1.0531 | |
| 438 | Y | A | 0.8443 | |
| 439 | Q | A | -0.2559 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine