| Chain sequence(s) |
A: AVNMNAINFDAAVNMNAIDNMN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:16)
[INFO] Main: Simulation completed successfully. (00:00:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.7486 | |
| 2 | V | A | 1.4821 | |
| 3 | N | A | -0.3220 | |
| 4 | M | A | 0.4732 | |
| 5 | N | A | -0.8234 | |
| 6 | A | A | -0.0978 | |
| 7 | I | A | 0.3852 | |
| 8 | N | A | -0.5608 | |
| 9 | F | A | 1.0914 | |
| 10 | D | A | -0.6186 | |
| 11 | A | A | -0.0918 | |
| 12 | A | A | 0.7316 | |
| 13 | V | A | 1.0418 | |
| 14 | N | A | -0.2663 | |
| 15 | M | A | 0.5918 | |
| 16 | N | A | -0.8313 | |
| 17 | A | A | -0.0546 | |
| 18 | I | A | 0.8402 | |
| 19 | D | A | -1.6006 | |
| 20 | N | A | -1.6778 | |
| 21 | M | A | -0.0297 | |
| 22 | N | A | -1.2413 |