Project name: 35266d3dfdd207d

Status: done

Started: 2026-05-20 11:00:12
Settings
Chain sequence(s) A: FFKGHGF
C: FFKGHGF
B: FFKGHGF
E: FFKGHGF
D: FFKGHGF
G: FFKGHGF
F: FFKGHGF
I: FFKGHGF
H: FFKGHGF
K: FFKGHGF
J: FFKGHGF
L: FFKGHGF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:25)
Show buried residues

Minimal score value
-2.1751
Maximal score value
3.7751
Average score
0.5082
Total score value
42.6849

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 2.9142
2 F A 0.0000
3 K A -1.6079
4 G A 0.0000
5 H A -1.0069
6 G A 0.0000
7 F A 3.0316
1 F B 2.9425
2 F B 1.1739
3 K B -1.6624
4 G B -1.9838
5 H B -1.2257
6 G B 0.6890
7 F B 2.8286
1 F C 2.6901
2 F C 0.0000
3 K C -2.1013
4 G C -2.1751
5 H C -0.9348
6 G C 0.0000
7 F C 3.5024
1 F D 2.4699
2 F D 0.0000
3 K D -1.7408
4 G D 0.0000
5 H D -0.7159
6 G D 0.0000
7 F D 3.2119
1 F E 3.0574
2 F E 0.0000
3 K E -1.3809
4 G E 0.0000
5 H E -0.5128
6 G E 0.0000
7 F E 2.9866
1 F F 2.6042
2 F F 0.0000
3 K F -1.1562
4 G F 0.0000
5 H F -0.6810
6 G F 0.0000
7 F F 2.9703
1 F G 2.9620
2 F G 0.8888
3 K G -1.7156
4 G G -1.9592
5 H G -0.6008
6 G G 0.0000
7 F G 3.7621
1 F H 3.5017
2 F H 2.5709
3 K H -0.8926
4 G H -2.0665
5 H H -1.4995
6 G H 0.4296
7 F H 2.4723
1 F I 3.7751
2 F I 0.0000
3 K I -0.9814
4 G I 0.0000
5 H I -0.9713
6 G I 0.0000
7 F I 2.8355
1 F J 2.9069
2 F J 0.0000
3 K J -1.6829
4 G J 0.0000
5 H J -0.5778
6 G J 0.0000
7 F J 3.0470
1 F K 2.6920
2 F K 0.0000
3 K K -1.4674
4 G K 0.0000
5 H K -0.3184
6 G K 0.0000
7 F K 2.9379
1 F L 3.2087
2 F L 0.0000
3 K L -1.2720
4 G L 0.0000
5 H L -0.6325
6 G L 0.0000
7 F L 3.1452
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Laboratory of Theory of Biopolymers 2018