| Chain sequence(s) |
A: MPPILRFDHPFLFIIFEEHTQSPIFLGKVVDPTHK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | FA11A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 3.10345 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:13)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:16)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:27)
[INFO] Main: Simulation completed successfully. (00:00:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.1359 | |
| 2 | P | A | 0.8046 | |
| 3 | P | A | 1.0541 | |
| 4 | I | A | 2.4275 | |
| 5 | L | A | 1.7339 | |
| 6 | R | A | -0.3644 | |
| 7 | F | A | 0.6404 | |
| 8 | D | A | -1.5529 | |
| 9 | H | A | -1.2432 | |
| 10 | P | A | 0.1707 | |
| 11 | A | A | 0.9137 | mutated: FA11A |
| 12 | L | A | 2.4774 | |
| 13 | F | A | 3.1768 | |
| 14 | I | A | 4.0042 | |
| 15 | I | A | 3.6581 | |
| 16 | F | A | 2.0891 | |
| 17 | E | A | -0.6249 | |
| 18 | E | A | -2.4538 | |
| 19 | H | A | -2.3057 | |
| 20 | T | A | -1.7463 | |
| 21 | Q | A | -1.8949 | |
| 22 | S | A | -0.2763 | |
| 23 | P | A | 1.8990 | |
| 24 | I | A | 3.3624 | |
| 25 | F | A | 4.5802 | |
| 26 | L | A | 3.8682 | |
| 27 | G | A | 1.9384 | |
| 28 | K | A | 0.2990 | |
| 29 | V | A | 0.7602 | |
| 30 | V | A | 0.8548 | |
| 31 | D | A | -0.9193 | |
| 32 | P | A | -1.1704 | |
| 33 | T | A | -1.1044 | |
| 34 | H | A | -1.8178 | |
| 35 | K | A | -2.3307 |